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Found 42 result(s)

REFOLDdb

including: REFOLD

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REFOLD has merged to REFOLDdb. REFOLDdb is a unique database for the life sciences research community, providing annotated information for designing new refolding protocols and customizing existing methodologies. We envisage that this resource will find wide utility across broad disciplines that rely on the production of pure, active, recombinant proteins. Furthermore, the database also provides a useful overview of the recent trends and statistics in refolding technology development.We based our resource on the existing REFOLD database, which has not been updated since 2009. We redesigned the data format to be more concise, allowing consistent representations among data entries compared with the original REFOLD database. The remodeled data architecture enhances the search efficiency and improves the sustainability of the database. After an exhaustive literature search we added experimental refolding protocols from reports published 2009 to early 2017. In addition to this new data, we fully converted and integrated existing REFOLD data into our new resource.

Combined QTL Map of Dairy Cattle Traits

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>>>!!! <<< 2021-09-01: repository is offline >>>!!!<<< Background: Many studies have been conducted to detect quantitative trait loci (QTL) in dairy cattle. However, these studies are diverse in terms of their differing resource populations, marker maps, phenotypes, etc, and one of the challenges is to be able to synthesise this diverse information. This web page has been constructed to provide an accessible database of studies, providing a summary of each study, facilitating an easier comparison across studies. However, it also highlights the need for uniform reporting of results of studies, to facilitate more direct comparisons being made. Description: Studies recorded in this database include complete and partial genome scans, single chromosome scans, as well as fine mapping studies, and contain all known reports that were published in peer-reviewed journals and readily available conference proceedings, initially up to April 2005. However, this data base is being added to, as indicated by the last web update. Note that some duplication of results will occur, in that there may be a number of reports on the same resource population, but utilising different marker densities or different statistical methodologies. The traits recorded in this map are milk yield, milk composition (protein yield, protein %, fat yield, fat %), and somatic cell score (SCS).

Stemformatics

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Stemformatics is a collaboration between the stem cell and bioinformatics community. We were motivated by the plethora of exciting cell models in the public and private domains, and the realisation that for many biologists these were mostly inaccessible. We wanted a fast way to find and visualise interesting genes in these exemplar stem cell datasets. We'd like you to explore. You'll find data from leading stem cell laboratories in a format that is easy to search, easy to visualise and easy to export.

cropPAL

Compendium of crop Proteins with Annotated Locations

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<<<!!!<<<This repository is no longer available>>>!!!>>>

Australian Drosophila Ecology and Evolution Resource

ADEER

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The Australian Drosophila Ecology and Evolution Resource (ADEER) from the Hoffmann lab and other contributors is a nationally significant life science collection. The Drosophila Clinal Data Collection contains data on populations along the eastern coast of Australia. It remains an excellent resource for understanding past and future evolutionary responses to climate change. The Drosophila Genomic Data Collection hosts Drosophila genomes sequenced as part of the Genomic Basis for Adaptation to Climate Change Project. 23 genomes have been sequenced as part of this project. Currently assemblies and annotations are available for Drosophila birchii, D. bunnanda, D. hydei, and D. repleta. The Drosophila Species Distribution Data Collection contains distribution data of nine drosophilid species that have been collected in Australia by the Hoffmann lab and other research groups between 1924 and 2005. More than 300 drosophilid species have been identified in the tropical and temperate forests located on the east coast of Australia. Many species are restricted to the tropics, a few are temperate specialists, and some have broad distributions across climatic regions. Their varied distribution along the tropical - temperate cline provide a powerful tool for studying climate adaptation and species distribution limits.

VecNet

Vector-Borne Disease Network

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<<<!!!<<< The repository is no longer available. 2019-09-06: no more access to VecNet >>>!!!>>>

EarthByte

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EarthByte is an internationally leading eGeoscience collaboration between several Australian Universities, international centres of excellence and industry partners. One of the fundamental aims of the EarthByte Group is geodata synthesis through space and time, assimilating the wealth of disparate geological and geophysical data into a four-dimensional Earth model including tectonics, geodynamics and surface processes. The EarthByte Group is pursuing open innovation via collaborative software development, high performance and distributed computing, “big data” analysis and by making open access digital data collections available to the community.

45 and Up Study

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More than a quarter of a million people — one in 10 NSW men and women aged over 45 — have been recruited to our 45 and Up Study, the largest ongoing study of healthy ageing in the Southern Hemisphere. The baseline information collected from all of our participants is available in the Study’s Data Book. This information, which researchers use as the basis for their analyses, contains information on key variables such as height, weight, smoking status, family history of disease and levels of physical activity. By following such a large group of people over the long term, we are developing a world-class research resource that can be used to boost our understanding of how Australians are ageing. This will answer important health and quality-of-life questions and help manage and prevent illness through improved knowledge of conditions such as cancer, heart disease, depression, obesity and diabetes.

AEKOS Data Portal

Advanced Ecological and Knowledge Observation System Data Portal

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TERN's AEKOS data portal is the original gateway to Australian ecology data. It is a ‘data and research methods’ data portal for Australia’s land-dwelling plants, animals and their environments. The primary focus of data content is raw co-located ‘species and environment’ ecological survey data that has been collected at the ‘plot’ level to describe biodiversity, its patterns and ecological processes. It is openly accessible with standard discovery metadata and user-oriented, contextual metadata critical for data reuse. Our services support the ecosystem science community, land managers and governments seeking to publish under COPE publishing ethics and the FAIR data publishing principles. AEKOS is registered with Thomson & Reuters Data Citation Index and is a recommended repository of Nature Publishing’s Scientific Data. There are currently 97,037 sites covering mostly plant biodiversity and co-located environmental data of Australia. The AEKOS initiative is supported by TERN (tern.org.au), hosted by The University of Adelaide and funded by the Australian Government’s National Research Infrastructure for Australia.

e-Atlas

Australia's Tropical Land and Seas

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The eAtlas is a website, mapping system and set of data visualisation tools for presenting research data in an accessible form that promotes greater use of this information. The eAtlas will serve as the primary data and knowledge repository for all NERP Tropical Ecosystems Hub projects, which focus on the on the Great Barrier Reef, Wet Tropics rainforest and Torres Strait. The eAtlas will capture and record research outcomes and make them available to research-users in a timely, readily accessible manner. It will host meta-data records and provide an enduring repository for raw data. It will also develop and host web visualisations to view information using a simple and intuitive interface. This will assist scientists with data discovery and allow environmental managers to access and investigate research data.

UniSA Research Data Access Portal

University of South Australia Research Data Access Portal

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The UniSA Data Access Portal showcases a range of Open Access research collections and datasets developed or collected by the University of South Australia. The UniSA Data Access Portal also highlights research projects and publications related to the available collections and datasets, and facilitates a variety of searches by researcher, organisation, discipline and keyword. Research collections and datasets available in Open Access can be freely downloaded and used to support your research in line with the terms of the licence under which they are made available.

University of Southern Queensland research data collection

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University of Southern Queensland Research Data Collection in Research Data Australia cover 123 subjects areas including Agricultural and Veterinary Sciences, Environmental Sciences and Engineering.

fossilworks

Paleobiology Database

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Fossilworks is a web-based portal to the Paleobiology Database. Fossilworks is the original public interface to the PaleoDB and is housed at Macquarie. It is a non-governmental, non-profit public resource. Its purpose is to provide global, collection-based occurrence and taxonomic data for marine and terrestrial animals and plants of any geological age, as well as web-based software for statistical analysis of the data. The project's wider, long-term goal is to encourage collaborative efforts to answer large-scale paleobiological questions by developing a useful database infrastructure and bringing together large data sets.

eFish

Genomic Database Repository

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The project aims to examine and index the genomic diversity through the generation of complete mitochondrial and nuclear genome sequences of sharks and rays of the Pacific Rim. There is a huge diversity of elasmobranch fishes in this region, but many species are under threat because of poor management and conservation measures in many countries. It is absolutely critical that species’ identities are correct for conservation and fisheries management purposes. This project will provide this clarity of identity for both charismatic and commercially important species through the inclusion of ‘genetypes’ (ie., BioVouchers) and the application of genetic tools that utilize whole mitochondrial and nuclear genome sequences.

TERN Data Discovery Portal

TDDP

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The TERN Data Discovery Portal (TDDP) is a gateway to search and access all the datasets published by the Australian Terrestrial Ecosystem Research Network. In the TERN data discovery portal, users can conduct textual and graphical searches on the metadata catalogue using a web interface with temporal, spatial, and eco science related controlled vocabulary keywords. Requests to download data discovered through different data services associated with TERN. Downloading, using and sharing data will be subjected to the TERN data licensing framework (https://www.tern.org.au/datalicence/).

Store.Synchrotron Data Store

myTARDIS Diffraction Image Repository

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<<<!!!<<< The repository is offline >>>!!!>>> Store.Synchrotron is a fully functional, cloud computing based solution to raw X-ray data archival and dissemination at the Australian Synchrotron, largest stand-alone piece of scientific infrastructure in the southern hemisphere. Store.Synchrotron represents the logical extension of a long-standing effort in the macromolecular crystallography community to ensure that satisfactory evidence is provided to support the interpretation of structural experiments.

Deakin Research Online

DRO

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DRO is Deakin University's research repository, providing digital curation by describing and preserving the University's research output and enabling worldwide discovery.