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Found 32 result(s)

NARSTO

North American Research Strategy for Tropospheric Ozone

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>>>!!!<<< the repository is offline >>>!!!<<< NARSTO is dedicated to improving management of air quality in North America. Additionally, NARSTO is working to improve collaboration between the air-quality and health-sciences research communities, to advance understanding of the scientific issues involved in effecting a multi-pollutant/multi-media approach to air quality management, and to increase understanding of the linkages between air quality and climate change. NARSTO is represented by private and public organizations in Canada, Mexico, and the United States. NARSTO was terminated as of December 31, 2010. While data remain available via the original NARSTO Data Archive, the permanent data archive is maintained by the NASA Langley Research Center Atmospheric Science Data Center

Brain Image Library

BIL

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Brain Image Library (BIL) is an NIH-funded public resource serving the neuroscience community by providing a persistent centralized repository for brain microscopy data. Data scope of the BIL archive includes whole brain microscopy image datasets and their accompanying secondary data such as neuron morphologies, targeted microscope-enabled experiments including connectivity between cells and spatial transcriptomics, and other historical collections of value to the community. The BIL Analysis Ecosystem provides an integrated computational and visualization system to explore, visualize, and access BIL data without having to download it.

Jason Virtual Van

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Jason is a remote-controlled deep-diving vessel that gives shipboard scientists immediate, real-time access to the sea floor. Instead of making short, expensive dives in a submarine, scientists can stay on deck and guide Jason as deep as 6,500 meters (4 miles) to explore for days on end. Jason is a type of remotely operated vehicle (ROV), a free-swimming vessel connected by a long fiberoptic tether to its research ship. The 10-km (6 mile) tether delivers power and instructions to Jason and fetches data from it.

DOE Joint Genome Institute Genome Portal

US Department of Energy Joint Genome Institute Genome Web Portal

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The Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility with massive-scale DNA sequencing and analysis capabilities dedicated to advancing genomics for bioenergy and environmental applications. Beyond generating tens of trillions of DNA bases annually, the Institute develops and maintains data management systems and specialized analytical capabilities to manage and interpret complex genomic data sets, and to enable an expanding community of users around the world to analyze these data in different contexts over the web. The JGI Genome Portal provides a unified access point to all JGI genomic databases and analytical tools. A user can find all DOE JGI sequencing projects and their status, search for and download assemblies and annotations of sequenced genomes, and interactively explore those genomes and compare them with other sequenced microbes, fungi, plants or metagenomes using specialized systems tailored to each particular class of organisms. Databases: Genome Online Database (GOLD), Integrated Microbial Genomes (IGM), MycoCosm, Phytozome

Pediatric MRI Data Repository

PedsMRI

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<<<!!!<<< integrated in https://www.re3data.org/repository/r3d100012653 >>>!!!>>>

NOAA Antarctic UV Monitoring Network

formerly: National Science Foundation Polar Programs UV Monitoring Network

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The National Science Foundation (NSF) Ultraviolet (UV) Monitoring Network provides data on ozone depletion and the associated effects on terrestrial and marine systems. Data are collected from 7 sites in Antarctica, Argentina, United States, and Greenland. The network is providing data to researchers studying the effects of ozone depletion on terrestrial and marine biological systems. Network data is also used for the validation of satellite observations and for the verification of models describing the transfer of radiation through the atmosphere.

GHRC

Global Hydrology Resource Center

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The Global Hydrology Resource Center (GHRC) provides both historical and current Earth science data, information, and products from satellite, airborne, and surface-based instruments. GHRC acquires basic data streams and produces derived products from many instruments spread across a variety of instrument platforms.

Database of Interacting Proteins

DIP

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The DIP database catalogs experimentally determined interactions between proteins. It combines information from a variety of sources to create a single, consistent set of protein-protein interactions. The data stored within the DIP database were curated, both, manually by expert curators and also automatically using computational approaches that utilize the the knowledge about the protein-protein interaction networks extracted from the most reliable, core subset of the DIP data. Please, check the reference page to find articles describing the DIP database in greater detail. The Database of Ligand-Receptor Partners (DLRP) is a subset of DIP (Database of Interacting Proteins). The DLRP is a database of protein ligand and protein receptor pairs that are known to interact with each other. By interact we mean that the ligand and receptor are members of a ligand-receptor complex and, unless otherwise noted, transduce a signal. In some instances the ligand and/or receptor may form a heterocomplex with other ligands/receptors in order to be functional. We have entered the majority of interactions in DLRP as full DIP entries, with links to references and additional information

Global Precipitation Measurement

GPM

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The Global Precipitation Measurement (GPM) mission is an international network of satellites that provide the next-generation global observations of rain and snow. Building upon the success of the Tropical Rainfall Measuring Mission (TRMM), the GPM concept centers on the deployment of a “Core” satellite carrying an advanced radar / radiometer system to measure precipitation from space and serve as a reference standard to unify precipitation measurements from a constellation of research and operational satellites.

WHOI Ship Data-Grabber System

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The WHOI Ship DataGrabber system provides the oceanographic community on-line access to underway ship data collected on the R/V Atlantis, Knorr, Oceanus, and Tioga (TBD). All the shipboard data is co-registered with the ship's GPS time and navigation systems.

Bacterial and Viral Bioinformatics Resource Center

BV-BRC

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The Bacterial and Viral Bioinformatics Resource Center (BV-BRC) is an information system designed to support research on bacterial and viral infectious diseases. BV-BRC combines two long-running BRCs: PATRIC, the bacterial system, and IRD/ViPR, the viral systems.

Xenbase

Xenopus Genomics Database

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Xenbase's mission is to provide the international research community with a comprehensive, integrated and easy to use web based resource that gives access the diverse and rich genomic, expression and functional data available from Xenopus research. Xenbase also provides a critical data sharing infrastructure for many other NIH-funded projects, and is a focal point for the Xenopus community. In addition to our primary goal of supporting Xenopus researchers, Xenbase enhances the availability and visibility of Xenopus data to the broader biomedical research community.

AmeriFlux

Measuring carbon, water and energy flux across the Americas

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AmeriFlux is a network of PI-managed sites measuring ecosystem CO2, water, and energy fluxes in North, Central and South America. It was established to connect research on field sites representing major climate and ecological biomes, including tundra, grasslands, savanna, crops, and conifer, deciduous, and tropical forests. As a grassroots, investigator-driven network, the AmeriFlux community has tailored instrumentation to suit each unique ecosystem. This “coalition of the willing” is diverse in its interests, use of technologies and collaborative approaches. As a result, the AmeriFlux Network continually pioneers new ground.

GRACE ISDC

Gravity Recovery and Climate Experiment

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The twin GRACE satellites were launched on March 17, 2002. Since that time, the GRACE Science Data System (SDS) has produced and distributed estimates of the Earth gravity field on an ongoing basis. These estimates, in conjunction with other data and models, have provided observations of terrestrial water storage changes, ice-mass variations, ocean bottom pressure changes and sea-level variations. This portal, together with PODAAC, is responsible for the distribution of the data and documentation for the GRACE project.

UCSD Signaling gateway

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<<<!!!<<< This repository is no longer available. >>>!!!>>>

Array Express

functional genomics data

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ArrayExpress is one of the major international repositories for high-throughput functional genomics data from both microarray and high-throughput sequencing studies, many of which are supported by peer-reviewed publications. Data sets are submitted directly to ArrayExpress and curated by a team of specialist biological curators. In the past (until 2018) datasets from the NCBI Gene Expression Omnibus database were imported on a weekly basis. Data is collected to MIAME and MINSEQE standards.

Woods Hole Oceanographic Institution Data Library and Archives

WHOI DLA

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The Data Library and Archives (DLA) is part of the joint library system supported by the Marine Biological Laboratory and the Woods Hole Oceanographic Institution. The DLA holds collections of administrative records, photographs, scientists' data and papers, film and video, historical instruments, as well as books, journals and technical reports.

GenBank

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GenBank® is a comprehensive database that contains publicly available nucleotide sequences for almost 260 000 formally described species. These sequences are obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects, including whole-genome shotgun (WGS) and environmental sampling projects. Most submissions are made using the web-based BankIt or standalone Sequin programs, and GenBank staff assigns accession numbers upon data receipt. Daily data exchange with the European Nucleotide Archive (ENA) and the DNA Data Bank of Japan (DDBJ) ensures worldwide coverage. GenBank is accessible through the NCBI Entrez retrieval system, which integrates data from the major DNA and protein sequence databases along with taxonomy, genome, mapping, protein structure and domain information, and the biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP.

Chemical Effects in Biological Systems

CEBS

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The CEBS database houses data of interest to environmental health scientists. CEBS is a public resource, and has received depositions of data from academic, industrial and governmental laboratories. CEBS is designed to display data in the context of biology and study design, and to permit data integration across studies for novel meta analysis.

National Snow and Ice Data Center

NSIDC

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NSIDC offers hundreds of scientific data sets for research, focusing on the cryosphere and its interactions. Data are from satellites and field observations. All data are free of charge.

Cassavabase

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Breeding, molecular, genetics and genomics data on cassava (Manihot esculenta) and wild relatives

Tropical Rainfall Measuring Mission

TRMM

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<<<!!!<<< This repository is no longer available. >>>!!!>>> TRMM is a research satellite designed to improve our understanding of the distribution and variability of precipitation within the tropics as part of the water cycle in the current climate system. By covering the tropical and sub-tropical regions of the Earth, TRMM provides much needed information on rainfall and its associated heat release that helps to power the global atmospheric circulation that shapes both weather and climate. In coordination with other satellites in NASA's Earth Observing System, TRMM provides important precipitation information using several space-borne instruments to increase our understanding of the interactions between water vapor, clouds, and precipitation, that are central to regulating Earth's climate. The TRMM mission ended in 2015 and final TRMM multi-satellite precipitation analyses (TMPA, product 3B42/3B43) data processing will end December 31st, 2019. As a result, this TRMM webpage is in the process of being retired and some TRMM imagery may not be displaying correctly. Some of the content will be moved to the Precipitation Measurement Missions website https://gpm.nasa.gov/ and our team is exploring ways to provide some of the real-time products using GPM data. Please contact us if you have any additional questions.

Incorporated Research Institutions for Seismology

IRIS

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IRIS offers free and open access to a comprehensive data store of raw geophysical time-series data collected from a large variety of sensors, courtesy of a vast array of US and International scientific networks, including seismometers (permanent and temporary), tilt and strain meters, infrasound, temperature, atmospheric pressure and gravimeters, to support basic research aimed at imaging the Earth's interior.

Goddard Earth Sciences Data and Information Services Center

GES DISC

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One of twelve NASA Science Mission Directorate (SMD) Data Centers that provide Earth science data, information, and services to research scientists, applications scientists, applications users, and students. The GES DISC is the home (archive) of NASA Precipitation and Hydrology, as well as Atmospheric Composition and Dynamics remote sensing data and information. The DISC also houses the Modern Era Retrospective-Analysis for Research and Applications (MERRA) data assimilation datasets (generated by GSFC’s Global Modeling and Assimilation Office), and the North American Land Data Assimilation System (NLDAS) and Global Land Data Assimilation System (GLDAS) data products (both generated by GSFC's Hydrological Sciences Branch).

UNAVCO

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UNAVCO promotes research by providing access to data that our community of geodetic scientists uses for quantifying the motions of rock, ice and water that are monitored by a variety of sensor types at or near the Earth's surface. After processing, these data enable millimeter-scale surface motion detection and monitoring at discrete points, and high-resolution strain imagery over areas of tens of square meters to hundreds of square kilometers. The data types include GPS/GNSS, imaging data such as from SAR and TLS, strain and seismic borehole data, and meteorological data. Most of these can be accessed via web services. In addition, GPS/GNSS datasets, TLS datasets, and InSAR products are assigned digital object identifiers.