Filter
Reset all

Subjects

Content Types

Countries

AID systems

API

Certificates

Data access

Data access restrictions

Database access

Database access restrictions

Database licenses

Data licenses

Data upload

Data upload restrictions

Enhanced publication

Institution responsibility type

Institution type

Keywords

Metadata standards

PID systems

Provider types

Quality management

Repository languages

Software

Syndications

Repository types

Versioning

  • * at the end of a keyword allows wildcard searches
  • " quotes can be used for searching phrases
  • + represents an AND search (default)
  • | represents an OR search
  • - represents a NOT operation
  • ( and ) implies priority
  • ~N after a word specifies the desired edit distance (fuzziness)
  • ~N after a phrase specifies the desired slop amount
Found 778 result(s)

Tropical Atmosphere Ocean Project

TAO/TRITON array

Subject(s)
Content type(s)
Country
Real-time data from moored ocean buoys for improved detection, understanding and prediction of El Niño and La Niña.

SeaBASS

Subject(s)
Content type(s)
Country
SeaBASS, the publicly shared archive of in situ oceanographic and atmospheric data maintained by the NASA Ocean Biology Processing Group (OBPG). High quality in situ measurements are prerequisite for satellite data product validation, algorithm development, and many climate-related inquiries. As such, the NASA Ocean Biology Processing Group (OBPG) maintains a local repository of in situ oceanographic and atmospheric data to support their regular scientific analyses. The SeaWiFS Project originally developed this system, SeaBASS, to catalog radiometric and phytoplankton pigment data used their calibration and validation activities. To facilitate the assembly of a global data set, SeaBASS was expanded with oceanographic and atmospheric data collected by participants in the SIMBIOS Program, under NASA Research Announcements NRA-96 and NRA-99, which has aided considerably in minimizing spatial bias and maximizing data acquisition rates. Archived data include measurements of apparent and inherent optical properties, phytoplankton pigment concentrations, and other related oceanographic and atmospheric data, such as water temperature, salinity, stimulated fluorescence, and aerosol optical thickness. Data are collected using a number of different instrument packages, such as profilers, buoys, and hand-held instruments, and manufacturers on a variety of platforms, including ships and moorings.

Gene Ontology

GO

Subject(s)
Content type(s)
Country
The mission of the GO Consortium is to develop a comprehensive, computational model of biological systems, ranging from the molecular to the organism level, across the multiplicity of species in the tree of life. The Gene Ontology (GO) knowledgebase is the world’s largest source of information on the functions of genes. This knowledge is both human-readable and machine-readable, and is a foundation for computational analysis of large-scale molecular biology and genetics experiments in biomedical research.

Online Mendelian Inheritance in Man

OMIM

Subject(s)
Content type(s)
Country
OMIM is a comprehensive, authoritative compendium of human genes and genetic phenotypes that is freely available and updated daily. OMIM is authored and edited at the McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, under the direction of Dr. Ada Hamosh. Its official home is omim.org.

Seafloor Sediments Data Collection

SEDCORE 2000

Subject(s)
Content type(s)
Country
Seafloor Sediments Data Collection is a collection of more than 14,000 archived marine geological samples recovered from the seafloor. The inventory includes long, stratified sediment cores, as well as rock dredges, surface grabs, and samples collected by the submersible Alvin.

WorldData.AI

Subject(s)
Content type(s)
Country
WorldData.AI comes with a built-in workspace – the next-generation hyper-computing platform powered by a library of 3.3 billion curated external trends. WorldData.AI allows you to save your models in its “My Models Trained” section. You can make your models public and share them on social media with interesting images, model features, summary statistics, and feature comparisons. Empower others to leverage your models. For example, if you have discovered a previously unknown impact of interest rates on new-housing demand, you may want to share it through “My Models Trained.” Upload your data and combine it with external trends to build, train, and deploy predictive models with one click! WorldData.AI inspects your raw data, applies feature processors, chooses the best set of algorithms, trains and tunes multiple models, and then ranks model performance.

tDAR

The Digital Archaeological Record

Subject(s)
Content type(s)
Country
The Digital Archaeological Record (tDAR) is an international digital repository for the digital records of archaeological investigations. tDAR’s use, development, and maintenance are governed by Digital Antiquity, an organization dedicated to ensuring the long-term preservation of irreplaceable archaeological data and to broadening the access to these data.

World Ocean Database

WOD

Subject(s)
Content type(s)
Country
The World Ocean Database (WOD) is a collection of scientifically quality-controlled ocean profile and plankton data that includes measurements of temperature, salinity, oxygen, phosphate, nitrate, silicate, chlorophyll, alkalinity, pH, pCO2, TCO2, Tritium, Δ13Carbon, Δ14Carbon, Δ18Oxygen, Freon, Helium, Δ3Helium, Neon, and plankton. WOD contains all data of "World Data Service Oceanography" (WDS-Oceanography).

OceanDataPortal

ODP

Subject(s)
Content type(s)
Country
<<<!!!<<< This repository is no longer available. >>>!!!>>> The programme "International Oceanographic Data and Information Exchange" (IODE) of the "Intergovernmental Oceanographic Commission" (IOC) of UNESCO was established in 1961. Its purpose is to enhance marine research, exploitation and development, by facilitating the exchange of oceanographic data and information between participating Member States, and by meeting the needs of users for data and information products.

World Ocean Atlas

WOA

Subject(s)
Content type(s)
Country
The World Ocean Atlas (WOA) contains objectively analyzed climatological fields of in situ temperature, salinity, oxygen, and other measured variables at standard depth levels for various compositing periods for the world ocean. Regional climatologies were created from the Atlas, providing a set of high resolution mean fields for temperature and salinity. A new version of the WOA is released in conjunction with each major update to the WOD, the largest collection of publicly available, uniformly formatted, quality controlled subsurface ocean profile data in the world.

NASA/IPAC Extragalactic Database

NED

Subject(s)
Content type(s)
Country
NED is a comprehensive database of multiwavelength data for extragalactic objects, providing a systematic, ongoing fusion of information integrated from hundreds of large sky surveys and tens of thousands of research publications. The contents and services span the entire observed spectrum from gamma rays through radio frequencies. As new observations are published, they are cross- identified or statistically associated with previous data and integrated into a unified database to simplify queries and retrieval. Seamless connectivity is also provided to data in NASA astrophysics mission archives (IRSA, HEASARC, MAST), to the astrophysics literature via ADS, and to other data centers around the world.

TeachingWithData.org

TwD

Subject(s)
Content type(s)
Country
<<<!!!<<< This repository is no longer available. >>>!!!>>> TeachingWithData.org is a portal where faculty can find resources and ideas to reduce the challenges of bringing real data into post-secondary classes. It allows faculty to introduce and build students' quantitative reasoning abilities with readily available, user-friendly, data-driven teaching materials.

Stanford Network Analysis Project

SNAP

Subject(s)
Content type(s)
Country
Stanford Network Analysis Platform (SNAP) is a general purpose network analysis and graph mining library. It is written in C++ and easily scales to massive networks with hundreds of millions of nodes, and billions of edges. It efficiently manipulates large graphs, calculates structural properties, generates regular and random graphs, and supports attributes on nodes and edges. SNAP is also available through the NodeXL which is a graphical front-end that integrates network analysis into Microsoft Office and Excel. The SNAP library is being actively developed since 2004 and is organically growing as a result of our research pursuits in analysis of large social and information networks. Largest network we analyzed so far using the library was the Microsoft Instant Messenger network from 2006 with 240 million nodes and 1.3 billion edges. The datasets available on the website were mostly collected (scraped) for the purposes of our research. The website was launched in July 2009.

HUGO Gene Nomenclature Committee

HGNC

Subject(s)
Content type(s)
Country
The HUGO Gene Nomenclature Committee (HGNC) assigned unique gene symbols and names to over 35,000 human loci, of which around 19,000 are protein coding. This curated online repository of HGNC-approved gene nomenclature and associated resources includes links to genomic, proteomic and phenotypic information, as well as dedicated gene family pages.

Expressed Sequence Tags database

dbEST

Subject(s)
Content type(s)
Country
dbEST is a division of GenBank that contains sequence data and other information on "single-pass" cDNA sequences, or "Expressed Sequence Tags", from a number of organisms. Expressed Sequence Tags (ESTs) are short (usually about 300-500 bp), single-pass sequence reads from mRNA (cDNA). Typically they are produced in large batches. They represent a snapshot of genes expressed in a given tissue and/or at a given developmental stage. They are tags (some coding, others not) of expression for a given cDNA library. Most EST projects develop large numbers of sequences. These are commonly submitted to GenBank and dbEST as batches of dozens to thousands of entries, with a great deal of redundancy in the citation, submitter and library information. To improve the efficiency of the submission process for this type of data, we have designed a special streamlined submission process and data format. dbEST also includes sequences that are longer than the traditional ESTs, or are produced as single sequences or in small batches. Among these sequences are products of differential display experiments and RACE experiments. The thing that these sequences have in common with traditional ESTs, regardless of length, quality, or quantity, is that there is little information that can be annotated in the record. If a sequence is later characterized and annotated with biological features such as a coding region, 5'UTR, or 3'UTR, it should be submitted through the regular GenBank submissions procedure (via BankIt or Sequin), even if part of the sequence is already in dbEST. dbEST is reserved for single-pass reads. Assembled sequences should not be submitted to dbEST. GenBank will accept assembled EST submissions for the forthcoming TSA (Transcriptome Shotgun Assembly) division. The individual reads which make up the assembly should be submitted to dbEST, the Trace archive or the Short Read Archive (SRA) prior to the submission of the assemblies.

NCBI Gene

Gene

Subject(s)
Content type(s)
Country
The Gene database provides detailed information for known and predicted genes defined by nucleotide sequence or map position. Gene supplies gene-specific connections in the nexus of map, sequence, expression, structure, function, citation, and homology data. Unique identifiers are assigned to genes with defining sequences, genes with known map positions, and genes inferred from phenotypic information. These gene identifiers are used throughout NCBI's databases and tracked through updates of annotation. Gene includes genomes represented by NCBI Reference Sequences (or RefSeqs) and is integrated for indexing and query and retrieval from NCBI's Entrez and E-Utilities systems.

Canada's Michael Smith Genome Sciences Centre

GSC

Subject(s)
Content type(s)
Country
We are a leading international centre for genomics and bioinformatics research. Our mandate is to advance knowledge about cancer and other diseases, to improve human health through disease prevention, diagnosis and therapeutic approaches, and to realize the social and economic benefits of genomics research.

Open Data Commons for Spinal Cord Injury

ODC-SCI

Subject(s)
Content type(s)
Country
A community platform to Share Data, Publish Data with a DOI, and get Citations. Advancing Spinal Cord Injury research through sharing of data from basic and clinical research.

Better Access to Data for Global Interdisciplinary Research

BADGIR

Subject(s)
Content type(s)
Country
<<<!!!<<< This repository is no longer available. >>>!!!>>>

U.S. Census Bureau TIGER/Line Shapefiles and TIGER/Line® Files

TIGER/Line® Shapefiles and TIGER/Line® Files

Subject(s)
Content type(s)
Country
The Census Bureau releases TIGER/Line shapefiles and metadata each year to the public. TIGER/Line shapefiles are spatial extracts from the Census Bureau’s MAF/TIGER database. They contain features such as roads, railroads, hydrographic features and legal and statistical boundaries.

Adult Blood Lead Epidemiology and Surveillance Interactive Database

ABLES

Subject(s)
Content type(s)
Country
ABLES provides data on lead exposure of adults in the United States. The data comes from laboratory-reported elevated blood lead levels.

NDSF Data Portal

National Deep Submergence Facility

Subject(s)
Content type(s)
Country
The National Deep Submergence Facility (NDSF) operates the Human Occupied Vehicle (HOV) Alvin, the Remote Operated Vehicle (ROV) Jason 2, and the Autonomous Underwater Vehicle (AUV) Sentry. Data acquired with these platforms is provided both to the science party on each expedition, and to the Woods Hole Oceanographic Institution (WHOI) Data Library.

OAFlux

WHOI OAFlux Project

Subject(s)
Content type(s)
Country
The Objectively Analyzed air-sea Fluxes (OAFlux) project is a research and development project focusing on global air-sea heat, moisture, and momentum fluxes. The project is committed to produce high-quality, long-term, global ocean surface forcing datasets from the late 1950s to the present to serve the needs of the ocean and climate communities on the characterization, attribution, modeling, and understanding of variability and long-term change in the atmosphere and the oceans.

CRAWDAD

Community Resource for Archiving Wireless Data At Dartmouth (US site)

Subject(s)
Content type(s)
Country
<<<!!!<<< CRAWDAD has moved to IEEE-Dataport https://www.re3data.org/repository/r3d100012569 The datasets in the Community Resource for Archiving Wireless Data at Dartmouth (CRAWDAD) repository are now hosted as the CRAWDAD Collection on IEEE Dataport. After nearly two decades as a stand-alone archive at crawdad.org, the migration of the collection to IEEE DataPort provides permanence and new visibility. >>>!!!>>>

AmoebaDB

Subject(s)
Content type(s)
Country
AmoebaDB belongs to the EuPathDB family of databases and is an integrated genomic and functional genomic database for Entamoeba and Acanthamoeba parasites. In its first iteration (released in early 2010), AmoebaDB contains the genomes of three Entamoeba species (see below). AmoebaDB integrates whole genome sequence and annotation and will rapidly expand to include experimental data and environmental isolate sequences provided by community researchers . The database includes supplemental bioinformatics analyses and a web interface for data-mining.