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Found 22 result(s)

Genome-Scale Metabolic Network DataBase

GSMNDB

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<<<!!!<<< 2019-12-23: the repository is offline >>>!!!>>> Introduction of genome-scale metabolic network: The completion of genome sequencing and subsequent functional annotation for a great number of species enables the reconstruction of genome-scale metabolic networks. These networks, together with in silico network analysis methods such as the constraint based methods (CBM) and graph theory methods, can provide us systems level understanding of cellular metabolism. Further more, they can be applied to many predictions of real biological application such as: gene essentiality analysis, drug target discovery and metabolic engineering

Harvard Medical School, Library of Integrated Network-Based Cellular Signatures Database

HMS, LINCS database

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The Database contains all publicly available HMS LINCS datasets and information for each dataset about experimental reagents (small molecule perturbagens, cells, antibodies, and proteins) and experimental and data analysis protocols.

Groundwater Information Network

GIN

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The Groundwater Information Network is developed to improve knowledge of groundwater systems, and enhance groundwater management, through increased access to groundwater information. GIN connects a variety of groundwater information from authoritative sources, such as water well databases, water monitoring data, aquifer and geology maps, and related publications. Provincial and territorial collaborators include British Columbia, Alberta, Saskatchewan, Manitoba, Ontario, Québec, Nova Scotia, Yukon and Newfoundland and Labrador; international collaborators include the USGS and others.

Smithsonian Tropical Research Institute Logo - Panama

CTFS-Panama

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Welcome to the digital flora of Panama. You may access the taxonomic list of lianas, common trees, shrubs and palms by species name, family, or by their common names in Panama. There are for each species: a botanical description, photos, scans, drawings, and a distribution map showing its presence or absence in a series of floristic inventories and plots established by the Center for Tropical Forest Science in the Panama Canal watershed. A map of its distribution in the countries of Panama and its neighbor Costa Rica includes data from the Global Biodiversity Information Facility (GBIF) network (https://www.gbif.org/). Some families include descriptions.

SDAC

Solar Data Analysis Center

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The Solar Data Analysis Center serves data from recent and current space-based solar-physics missions, funds and hosts much of the SolarSoft library, and leads the Virtual Solar Observatory (VSO) effort. SDAC is the active archive, providing network access to data from such missions as SOHO, Yohkoh, and TRACE.

BIGG Database

Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions

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BiGG is a knowledgebase of Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions. BiGG integrates several published genome-scale metabolic networks into one resource with standard nomenclature which allows components to be compared across different organisms. BiGG can be used to browse model content, visualize metabolic pathway maps, and export SBML files of the models for further analysis by external software packages. Users may follow links from BiGG to several external databases to obtain additional information on genes, proteins, reactions, metabolites and citations of interest.

GISTEMP

GISS Surface Temperature Analysis

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Surface air temperature change is a primary measure of global climate change. The GISTEMP project started in the late 1970s to provide an estimate of the changing global surface air temperature which could be compared with the estimates obtained from climate models simulating the effect of changes in atmospheric carbon dioxide, volcanic aerosols, and solar irradiance. The continuing analysis updates global temperature change from the late 1800s to the present.

AERONET

AErosol RObotic NETwork

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The AERONET (AErosol RObotic NETwork) program is a federation of ground-based remote sensing aerosol networks established by NASA and PHOTONS (PHOtométrie pour le Traitement Opérationnel de Normalisation Satellitaire; Univ. of Lille 1, CNES, and CNRS-INSU) and is greatly expanded by networks (e.g., RIMA, AeroSpan, AEROCAN, and CARSNET) and collaborators from national agencies, institutes, universities, individual scientists, and partners. The program provides a long-term, continuous and readily accessible public domain database of aerosol optical, microphysical and radiative properties for aerosol research and characterization, validation of satellite retrievals, and synergism with other databases. The network imposes standardization of instruments, calibration, processing and distribution.

CAIDA Data

The Cooperative Association for Internet Data Analysis

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The Cooperative Association for Internet Data Analysis (CAIDA) is a collaborative undertaking among organizations in the commercial, government, and research sectors aimed at promoting greater cooperation in the engineering and maintenance of a robust, scalable global Internet infrastructure.It is an independent analysis and research group with particular focus on: Collection, curation, analysis, visualization, dissemination of sets of the best available Internet data, providing macroscopic insight into the behavior of Internet infrastructure worldwide, improving the integrity of the field of Internet science, improving the integrity of operational Internet measurement and management, informing science, technology, and communications public policies.

NEPTUNE Canada

NEPTUNE Canada regional network

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>>>>!!!<<< NEPTUNE Canada is now part of Ocean Networks Canada and this website is being phased out. Please visit us on our new website at oceannetworks.ca >>>!!!<<< NEPTUNE Canada, the North-East Pacific Time-series Undersea Networked Experiments, is the world's first regional scale cabled deep ocean observing network. It consists of an 800km network of electro‐optic cable laid on the seabed over the northern Juan de Fuca tectonic plate, off the coast of British Columbia. This tectonic plate serves as an exceptional natural laboratory for ocean observation and experiments. NEPTUNE Canada instruments yield continuous real‐time data and imagery from the ocean surface to beneath the seafloor, and from the coast to the deep sea. They respond to events such as earthquakes, tsunamis, fish migrations, plankton blooms, storms and volcanic eruptions. NEPTUNE Canada offers a unique and exciting approach to ocean science.

VecNet

Vector-Borne Disease Network

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<<<!!!<<< The repository is no longer available. 2019-09-06: no more access to VecNet >>>!!!>>>

International Geodynamics and Earth Tide Service

IGETS Data Base at GFZ Potsdam

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IGETS is the International Geodynamics and Earth Tide Service of the International Association of Geodesy (IAG). The main objective of IGETS is to monitor temporal variations of the Earth gravity field through long‐term records from ground gravimeters, tiltmeters, strainmeters and other geodynamic sensors. IGETS continues the activities of the Global Geodynamics Project (GGP) to provide support to geodetic and geophysical research activities using superconducting gravimeter (SG) data within the context of an international network. Furthermore, IGETS continues the activities of the International Center for Earth Tides (ICET), in particular, in collecting, archiving and distributing Earth tide records from long series of gravimeters, tiltmeters, strainmeters and other geodynamic sensors. GFZ is the main Data Center and operates the IGETS data base of worldwide high precision SG records. EOST (Ecole et Observatoire des Sciences de la Terre, Strasbourg, France) is the secondary Data Center, The University of French Polynesia (Tahiti) and EOST (Strasbourg, France) are the two current Analysis Centers.

National Ecological Observatory Network

NEON

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Funded by the National Science Foundation (NSF) and proudly operated by Battelle, the National Ecological Observatory Network (NEON) program provides open, continental-scale data across the United States that characterize and quantify complex, rapidly changing ecological processes. The Observatory’s comprehensive design supports greater understanding of ecological change and enables forecasting of future ecological conditions. NEON collects and processes data from field sites located across the continental U.S., Puerto Rico, and Hawaii over a 30-year timeframe. NEON provides free and open data that characterize plants, animals, soil, nutrients, freshwater, and the atmosphere. These data may be combined with external datasets or data collected by individual researchers to support the study of continental-scale ecological change.

Scholarly Database at Indiana University

SDB

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The Scholarly Database (SDB) at Indiana University aims to serve researchers and practitioners interested in the analysis, modeling, and visualization of large-scale scholarly datasets. The online interface provides access to six datasets: MEDLINE papers, registered Clinical Trials, U.S. Patent and Trademark Office patents (USPTO), National Science Foundation (NSF) funding, National Institutes of Health (NIH) funding, and National Endowment for the Humanities funding – over 26 million records in total.

VirHostNet

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VirHostNet is a bioinformatic information system dedidacted to the biocuration, data integration, reproducible systems-level analysis and visualisation of Virus / Host protein-protein interactions Network based on graph theory. VirHostNet is an open and gold standard knowledgebase shared in PSI MITAB 2.5 format using the PSICQUIC webservice and distributed through the NDEx platform. VirHostNet is FAIR and is recognized as a COVID-19 ressource by Elixir bio.tools, the European Virus Bioinformatics Center and FAIRsharing.org.

Human protein-protein interaction network database search

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<<<!!!<<< This repository is no longer available. >>>!!!>>> A human interactome map. The sequencing of the human genome has provided a surprisingly small number of genes, indicating that the complex organization of life is not reflected in the gene number but, rather, in the gene products – that is, in the proteins. These macromolecules regulate the vast majority of cellular processes by their ability to communicate with each other and to assemble into larger functional units. Therefore, the systematic analysis of protein-protein interactions is fundamental for the understanding of protein function, cellular processes and, ultimately, the complexity of life. Moreover, interactome maps are particularly needed to link new proteins to disease pathways and the identification of novel drug targets.

ETH Travel Data Archive

ETHTDA

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<<<!!!<<< The documents are stored in the ETH Web archive and are no longer maintained >>>!!!>>>

National Marine Data and Information Service

NMDIS

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As the third center for oceanography of the World Data Center following WDC-A of the United States and WDC-B of Russia, WDC-D for oceanography boasts long-term and stable sources of domestic marine basic data. The State Oceanic Administration now has long-term observations obtained from the fixed coastal ocean stations, offshore and oceanic research vessels, moored and drifting buoys. More and more marine data have been available from the Chinese-foreign marine cooperative surveys, analysis and measurement of laboratory samples, reception by the satellite ground station, aerial telemeter and remote sensing, the GOOS program and global ships of opportunity reports, etc; More marine data are being and will be obtained from the ongoing “863” program, one of the state key projects during the Ninth Five-year plan and the seasat No 1 which is scheduled to be launched next year. Through many years’ effort, the WDC-D for oceanography has established formal relationship of marine data exchange with over 130 marine institutions in more than 60 countries in the world and is maintaining a close relationship of data exchange with over 30 major national oceanographic data centers. The established China Oceanic Information Network has joined the international marine data exchange system via Internet. Through these channels, a large amount data have been acquired of through international exchange, which, plus the marine data collected at home for many years, has brought the WDC-D for Oceanography over 100 years’ global marine data with a total data amounting to more than 10 billion bytes. In the meantime, a vast amount of work has been done in the standardized and normalized processing and management of the data, and a series of national and professional standards have been formulated and implemented successively. Moreover, appropriate standards and norms are being formulated as required.

GPS-PDR ISDC

GPS Potsdam Dresden Reprocessing

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<<<!!!<<< The data is in the phase of migration to another system. Therefore the repository is no longer available. This record is out-dated.; 2020-10-06 !!! >>>!!!>>> Due to the changes at the individual IGS analysis centers during these years the resulting time series of global geodetic parameters are inhomogeneous and inconsistent. A geophysical interpretation of these long series and the realization of a high-accuracy global reference frame are therefore difficult and questionable. The GPS reprocessing project GPS-PDR (Potsdam Dresden Reprocessing), initiated by TU München and TU Dresden and continued by GFZ Potsdam and TU Dresden, provides selected products of a homogeneously reprocessed global GPS network such as GPS satellite orbits and Earth rotation parameters.

National Biodiversity Information System of Mexico

Sistema Nacional de Información sobre Biodiversidad de México

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The National Biodiversity Information System (SNIB) of Mexico by the National Commission for the Knowledge and Use of Biodiversity (CONABIO). The SNIB is of strategic importance in a megadiversity country like Mexico, making it clear to CONABIO from the beginning that the SNIB should rely on the work of the multiplicity of institutions and national and foreign experts that for years have been dedicated to the study of biodiversity of Mexico. The creation of this system was expressed as a mandate for CONABIO in the General Law of Ecological Balance and Environmental Protection (LGEEPA Art. 80 fraction V). The participation of specialists in the generation of data and information for the SNIB is one of the various ways in which they collaborate with this system, since having an information system that allows the country to make informed decisions regarding its biodiversity requires that it be made up of data and information supported by a broad network of experts.

International GNSS Service

IGS

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The IGS global system of satellite tracking stations, Data Centers, and Analysis Centers puts high-quality GPS data and data products on line in near real time to meet the objectives of a wide range of scientific and engineering applications and studies. The IGS collects, archives, and distributes GPS observation data sets of sufficient accuracy to satisfy the objectives of a wide range of applications and experimentation. These data sets are used by the IGS to generate the data products mentioned above which are made available to interested users through the Internet. In particular, the accuracies of IGS products are sufficient for the improvement and extension of the International Terrestrial Reference Frame (ITRF), the monitoring of solid Earth deformations, the monitoring of Earth rotation and variations in the liquid Earth (sea level, ice-sheets, etc.), for scientific satellite orbit determinations, ionosphere monitoring, and recovery of precipitable water vapor measurements.

China Meteorological Data Service Center

CMDC

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China Meteorological Data Service Center, an upgraded system of the meteorological data sharing network, is an important component of the underlying national science and technology platform and a main portal application system of meteorological cloud. It is an authoritative and unified shared service platform for China Meteorological Administration to open its meteorological data resources to domestic and global users, and a data supporting platform for China to open its meteorological service market and promote the sharing and efficient application of meteorological information resources as a new meteorological service system. The comprehensive meteorological database provide online and offline shared services, the existing data types including global upper-air sounding data, surface observations, ocean observations, numerical forecast products, agro-meteorological data of ground observation data encryption, aircraft soundings, numerical weather prediction analysis field data, GPS-Met, Storm 2 No, GOES-9 satellite data, soil moisture, aircraft reported sandstorm monitoring, TOVS, ATOVS, wind profilers, satellite detection information.