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Found 143 result(s)

Coupled Model Intercomparison Project

CMIP

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Under the World Climate Research Programme (WCRP) the Working Group on Coupled Modelling (WGCM) established the Coupled Model Intercomparison Project (CMIP) as a standard experimental protocol for studying the output of coupled atmosphere-ocean general circulation models (AOGCMs). CMIP provides a community-based infrastructure in support of climate model diagnosis, validation, intercomparison, documentation and data access. This framework enables a diverse community of scientists to analyze GCMs in a systematic fashion, a process which serves to facilitate model improvement. Virtually the entire international climate modeling community has participated in this project since its inception in 1995. The Program for Climate Model Diagnosis and Intercomparison (PCMDI) archives much of the CMIP data and provides other support for CMIP. We are now beginning the process towards the IPCC Fifth Assessment Report and with it the CMIP5 intercomparison activity. The CMIP5 (CMIP Phase 5) experiment design has been finalized with the following suites of experiments: I Decadal Hindcasts and Predictions simulations, II "long-term" simulations, III "atmosphere-only" (prescribed SST) simulations for especially computationally-demanding models. The new ESGF peer-to-peer (P2P) enterprise system (http://pcmdi9.llnl.gov) is now the official site for CMIP5 model output. The old gateway (http://pcmdi3.llnl.gov) is deprecated and now shut down permanently.

National Snow and Ice Data Center

NSIDC

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NSIDC offers hundreds of scientific data sets for research, focusing on the cryosphere and its interactions. Data are from satellites and field observations. All data are free of charge.

Atmospheric Science Data Center

NASA Langley Research Center, Atmospheric Science Data Center

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The Atmospheric Science Data Center (ASDC) at NASA Langley Research Center is responsible for processing, archiving, and distribution of NASA Earth science data in the areas of radiation budget, clouds, aerosols, and tropospheric chemistry.The ASDC specializes in atmospheric data important to understanding the causes and processes of global climate change and the consequences of human activities on the climate.

IEDA

Interdisciplinary Earth Data Alliance

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IEDA2 is currently undergoing a website reconstruction and will be back soon. IEDA is a community-based facility that serves to support, sustain, and advance the geosciences by providing data services for observational Geoscience data from the Ocean, Earth, and Polar Sciences. IEDA welcomes and encourages investigators to contribute their data to the IEDA collections so that the data can be discovered and reused by a diverse community now and in the future. The IEDA collections are: EarthChem, Geochron, System for Earth Sample Registration (SESAR), Marine Geoscience Data System (MGDS), and USAP Data Center. Meta-Search provided on the portal through IEDA Data Browser http://www.iedadata.org/databrowser .

Rhea

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Rhea is a freely available and comprehensive resource of expert-curated biochemical reactions. It has been designed to provide a non-redundant set of chemical transformations for applications such as the functional annotation of enzymes, pathway inference and metabolic network reconstruction. There are three types of reaction participants (reactants and products): Small molecules, Rhea polymers, Generic compounds. All three types of reaction participants are linked to the ChEBI database (Chemical Entities of Biological Interest) which provides detailed information about structure, formula and charge. Rhea provides built-in validations that ensure both mass and charge balance of the reactions. We have populated the database with the reactions found in the enzyme classification (i.e. in the IntEnz and ENZYME databases), extending it with additional known reactions of biological interest. While the main focus of Rhea is enzyme-catalysed reactions, other biochemical reactions (including those that are often termed "spontaneous") also are included.

Freshwater Biodiversity Data Portal

BIOFRESH

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The aim of the Freshwater Biodiversity Data Portal is to integrate and provide open and free access to freshwater biodiversity data from all possible sources. To this end, we offer tools and support for scientists interested in documenting/advertising their dataset in the metadatabase, in submitting or publishing their primary biodiversity data (i.e. species occurrence records) or having their dataset linked to the Freshwater Biodiversity Data Portal. This information portal serves as a data discovery tool, and allows scientists and managers to complement, integrate, and analyse distribution data to elucidate patterns in freshwater biodiversity. The Freshwater Biodiversity Data Portal was initiated under the EU FP7 BioFresh project and continued through the Freshwater Information Platform (http://www.freshwaterplatform.eu). To ensure the broad availability of biodiversity data and integration in the global GBIF index, we strongly encourages scientists to submit any primary biodiversity data published in a scientific paper to national nodes of GBIF or to thematic initiatives such as the Freshwater Biodiversity Data Portal.

MycoBank

Fungal databases, nomenclature and species banks

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MycoBank is an on-line database aimed as a service to the mycological and scientific society by documenting mycological nomenclatural novelties (new names and combinations) and associated data, for example descriptions and illustrations. The nomenclatural novelties will each be allocated a unique MycoBank number that can be cited in the publication where the nomenclatural novelty is introduced. These numbers will also be used by the nomenclatural database Index Fungorum, with which MycoBank is associated.

The European Genome-phenome Archive

EGA

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The European Genome-phenome Archive (EGA) is designed to be a repository for all types of sequence and genotype experiments, including case-control, population, and family studies. We will include SNP and CNV genotypes from array based methods and genotyping done with re-sequencing methods. The EGA will serve as a permanent archive that will archive several levels of data including the raw data (which could, for example, be re-analysed in the future by other algorithms) as well as the genotype calls provided by the submitters. We are developing data mining and access tools for the database. For controlled access data, the EGA will provide the necessary security required to control access, and maintain patient confidentiality, while providing access to those researchers and clinicians authorised to view the data. In all cases, data access decisions will be made by the appropriate data access-granting organisation (DAO) and not by the EGA. The DAO will normally be the same organisation that approved and monitored the initial study protocol or a designate of this approving organisation. The European Genome-phenome Archive (EGA) allows you to explore datasets from genomic studies, provided by a range of data providers. Access to datasets must be approved by the specified Data Access Committee (DAC).

Centre National de Ressources Textuelles et Lexicales

CNRTL

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Created in 2005 by the CNRS, CNRTL unites in a single portal, a set of linguistic resources and tools for language processing. The CNRTL includes the identification, documentation (metadata), standardization, storage, enhancement and dissemination of resources. The sustainability of the service and the data is guaranteed by the backing of the UMR ATILF (CNRS - Université Nancy), support of the CNRS and its integration in the excellence equipment project ORTOLANG .

PhysioNet

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Modern signal processing and machine learning methods have exciting potential to generate new knowledge that will impact both physiological understanding and clinical care. Access to data - particularly detailed clinical data - is often a bottleneck to progress. The overarching goal of PhysioNet is to accelerate research progress by freely providing rich archives of clinical and physiological data for analysis. The PhysioNet resource has three closely interdependent components: An extensive archive ("PhysioBank"), a large and growing library of software ("PhysioToolkit"), and a collection of popular tutorials and educational materials

BioImage Archive

BIA

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The BioImage Archive stores and distributes life sciences imaging datasets. It supports deposition of biological imaging data associated with publications for the whole research community, as well as reference imaging datasets. All data deposited to the BioImage Archive is made openly accessible to the scientific community.

My Geo Hub

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This hub supports the geospatial modeling, data analysis and visualization needs of the broad research and education communities through hosting of groups, datasets, tools, training materials, and educational contents.

DRYAD

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Dryad is an open data publishing platform and a community committed to the open availability and routine re-use of all research data. We publish data in any format and any discipline. All Dryad data undergoes a curation process and is published under a CC0 waiver to promote reuse.

Polar Rock Repository Database

PRR

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The Polar Rock Repository (PRR) at the Byrd Polar and Climate Research Center (BPCRC) at Ohio State University is an NSF-OPP funded facility that provides access to rock, terrestrial drill core, glacial deposits and marine dredge samples from Antarctica and the Southern Ocean. The polar rock collection and database includes field notes, photos, maps, cores, powder and mineral residues, thin sections, and residues. Rock samples may be borrowed for research by university scientists. Samples may also be borrowed for educational or museum use in the United States.

Ensembl Fungi

e!EnsemblFungi

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EnsemblFungi is a genome-centric portal for fungal species. It is a project to maintain annotation on selected genomes.

DataFirst

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DataFirst's open research data repository, based at the University of Cape Town, gives open access to disaggregated administrative and survey data from African governments and research entities. DataFirst also operates a secure centre at the university to give researchers access to highly-disaggregated South African data.

Synapse

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Synapse is an open source software platform that clinical and biological data scientists can use to carry out, track, and communicate their research in real time. Synapse enables co-location of scientific content (data, code, results) and narrative descriptions of that work.

DesignSafe-CI Data Depot Repository

A Repository Infrastructure for Natural Hazards Datasets

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The DesignSafe Data Depot Repository (DDR) is the platform for curation and publication of datasets generated in the course of natural hazards research. The DDR is an open access data repository that enables data producers to safely store, share, organize, and describe research data, towards permanent publication, distribution, and impact evaluation. The DDR allows data consumers to discover, search for, access, and reuse published data in an effort to accelerate research discovery. It is a component of the DesignSafe cyberinfrastructure, which represents a comprehensive research environment that provides cloud-based tools to manage, analyze, curate, and publish critical data for research to understand the impacts of natural hazards. DesignSafe is part of the NSF-supported Natural Hazards Engineering Research Infrastructure (NHERI), and aligns with its mission to provide the natural hazards research community with open access, shared-use scholarship, education, and community resources aimed at supporting civil and social infrastructure prior to, during, and following natural disasters. It serves a broad national and international audience of natural hazard researchers (both engineers and social scientists), students, practitioners, policy makers, as well as the general public. It has been in operation since 2016, and also provides access to legacy data dating from about 2005. These legacy data were generated as part of the NSF-supported Network for Earthquake Engineering Simulation (NEES), a predecessor to NHERI. Legacy data and metadata belonging to NEES were transferred to the DDR for continuous preservation and access.

Bicocca Open Archive Research Data

BOARD

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BOARD (Bicocca Open Archive Research Data) is the institutional data repository of the University of Milano-Bicocca. BOARD is an open, free-to-use research data repository, which enables members of University of Milano-Bicocca to make their research data publicly available. By depositing their research data in BOARD researchers can: - Make their research data citable - Share their data privately or publicly - Ensure long-term storage for their data - Keep access to all versions - Link their article to their data

National Archive of Criminal Justice Data, Terrorism and Preparedness Data Resource Center

NACJD, TPDRC

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>>>!!!<<< The repository is no longer available. >>>!!!<<< TPDRC is part of NACJD

Top Down Proteomics Repository

TDPR

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This database will provide a central location for scientists to browse uniquely observed proteoforms and to contribute their own datasets. Top-down proteomics is a method of protein identification that uses an ion trapping mass spectrometer to store an isolated protein ion for mass measurement and tandem mass spectrometry analysis.

Ag Data Commons

USDA’s Open Research Data

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Ag Data Commons provides access to a wide variety of open data relevant to agricultural research. We are a centralized repository for data already on the web, as well as for new data being published for the first time. While compliance with the U.S. Federal public access and open data directives is important, we aim to surpass them. Our goal is to foster innovative data re-use, integration, and visualization to support bigger, better science and policy.

PhenoGen Informatics

PhenoGen

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The PhenoGen website shares experimental data with a worldwide community of investigators and provides a flexible, integrated, multi-resolution repository of neuroscience transcriptomic genetic data for collaborative research on genomic disorders. The main development focus is on providing Hybrid Rat Diversity Panel transcriptomic data (sequencing, genome coverage, reconstructed totalRNA/smallRNA transcriptomes, quanification of the transcriptome, eQTLs, and WGCNA) and integrating additional tools to provide platform for visualization and analysis of HRDP transcriptome data.

HilData

HILDEonline

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HilData is registered by Hildesheim University Library, The access is via registration to the data and to the repository. Research data is with regards to educational science. Research data are sensitive and cannot be made fully open. HILDE Online is integrated in HilData: https://www.uni-hildesheim.de/celeb/projekte/fallarchiv-hilde/hildeonline-streaming-server/ HilData is working on its metadata (exposing metadata via interfaces) w.r.t. the FAIR principles and data citation. HilData and HILDE Online provide long-term storage and access to research data. The research data repository provides restricted access to its data. The research data repository uses DOI to make its provided data persistent, unique and citable.

figshare

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figshare allows researchers to publish all of their research outputs in an easily citable, sharable and discoverable manner. All file formats can be published, including videos and datasets. Optional peer review process. figshare uses creative commons licensing. figshare+ repository allows figshare users to share larger datasets, over 20GB up to many TBs, see: https://plus.figshare.com/