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Found 200 result(s)

Kinetic models of biological systems

KiMoSys

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KiMoSys, a web application for quantitative KInetic MOdels of biological SYStems. Kinetic models, with the aim to understand and subsequently design the metabolism of organism of interest are constructed iteratively and require accurate experimental data for both the generation and verification of hypotheses. Therefore, there is a growing requirement for exchanging experimental data and models between the systems biology community, and to automate as much as possible the kinetic model building, editing, simulation and analysis steps.

ResearchGate Data

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ResearchGate is a network where 15+ million scientists and researchers worldwide connect to share their work. Researchers can upload data of any type and receive DOIs, detailed statistics and real-time feedback. In Data discovery Section of ResearchGate you can explore the added datasets.

Research Data Australia

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Research Data Australia is the data discovery service of the Australian Research Data Commons (ARDC). The ARDC is supported by the Australian Government through the National Collaborative Research Infrastructure Strategy Program. Research Data Australia helps you find, access, and reuse data for research from over one hundred Australian research organisations, government agencies, and cultural institutions. We do not store the data itself here but provide descriptions of, and links to, the data from our data publishing partners.

PubData

Research Data Repository Leuphana University Lüneburg

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PubData is Leuphana's institu­tional research data reposi­tory for the long-term preser­vation, documen­tation and publi­cation of research data from scienti­fic projects. PubData is main­tained by Leuphana's Media and Infor­mation Centre (MIZ) and is free of charge. The service is primarily aimed at Leuphana em­ployees and additionally at re­searchers from coope­ration partners con­tractually asso­ciated with Leuphana.

Discover

UB Discover

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Discover provides access to research data from projects related to LMU Munich, which are stored and preserved in repositories of the University Library LMU.

Arca Dados

Arca Data

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Arca Data is Fiocruz's official repository for archiving, publishing, disseminating, preserving and sharing digital research data produced by the Fiocruz community or in partnership with other research institutes or bodies, with the aim of promoting new research, ensuring the reproducibility or replicability of existing research and promoting an Open and Citizen Science. Its objective is to stimulate the wide circulation of scientific knowledge, strengthening the institutional commitment to Open Science and free access to health information, in addition to providing transparency and fostering collaboration between researchers, educators, academics, managers and graduate students, to the advancement of knowledge and the creation of solutions that meet the demands of society.

Portal Zarządzania Wiedzą UJ CM

Knowledge Management Platform of Jagiellonian University Medical College

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Portal Zarządzania Wiedzą UJ CM is a knowledge and research potential management platform of medical information. Easy data localization will be possible thanks to DOI and URL addresses given by administrators of the Knowledge Management Platform JU MC. The data will be stored in 2 copies for 10 years.

Birdata

BirdLife Australia

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Birdata is your gateway to BirdLife Australia data including the Atlas of Australian Birds and Nest record scheme. You can use Birdata to draw bird distribution maps and generate bird lists for any part of the country. You can also join in the Atlas and submit survey information to this important environmental database. Birdata is a partnership between Birds Australia and the Tony and Lisette Lewis Foundation's WildlifeLink program to collect and make Birds Australia data available online.

Neotoma Paleoecology Database

Neotoma

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Neotoma is a multiproxy paleoecological database that covers the Pliocene-Quaternary, including modern microfossil samples. The database is an international collaborative effort among individuals from 19 institutions, representing multiple constituent databases. There are over 20 data-types within the Neotoma Paleoecological Database, including pollen microfossils, plant macrofossils, vertebrate fauna, diatoms, charcoal, biomarkers, ostracodes, physical sedimentology and water chemistry. Neotoma provides an underlying cyberinfrastructure that enables the development of common software tools for data ingest, discovery, display, analysis, and distribution, while giving domain scientists control over critical taxonomic and other data quality issues.

openICPSR

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A service of the Inter-university Consortium for Political and Social Research (ICPSR), openICPSR is a self-publishing repository for social, behavioral, and health sciences research data. openICPSR is particularly well-suited for the deposit of replication data sets for researchers who need to publish their raw data associated with a journal article so that other researchers can replicate their findings.

ARACHNE IDAI.objects

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Arachne is the central object-database of the German Archaeological Institute (DAI). In 2004 the DAI and the Research Archive for Ancient Sculpture at the University of Cologne (FA) joined the effort to support Arachne as a tool for free internet-based research. Arachne's database design uses a model that builds on one of the most basic assumptions one can make about archaeology, classical archaeology or art history: all activities in these areas can most generally be described as contextualizing objects. Arachne tries to avoid the basic mistakes of earlier databases, which limited their object modeling to specific project-oriented aspects, thus creating separated containers of only a small number of objects. All objects inside Arachne share a general part of their object model, to which a more class-specific part is added that describes the specialised properties of a category of material like architecture or topography. Seen on the level of the general part, a powerful pool of material can be used for general information retrieval, whereas on the level of categories and properties, very specific structures can be displayed.

Europeana collections

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Europeana is the trusted source of cultural heritage brought to you by the Europeana Foundation and a large number of European cultural institutions, projects and partners. It’s a real piece of team work. Ideas and inspiration can be found within the millions of items on Europeana. These objects include: Images - paintings, drawings, maps, photos and pictures of museum objects Texts - books, newspapers, letters, diaries and archival papers Sounds - music and spoken word from cylinders, tapes, discs and radio broadcasts Videos - films, newsreels and TV broadcasts All texts are CC BY-SA, images and media licensed individually.

City of Sydney - Research and statistics

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Sydney has a constantly updated bank of information for historians, researchers and demographers.

HomoMINT

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<<<!!!<<< This repository is no longer available. >>>!!!>>>

CIAT Dataverse

CIAT Research Online

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The International Center for Tropical Agriculture (CIAT), a member of the CGIAR Consortium, believes that open access contributes to its mission of reducing hunger and poverty, and improving human nutrition in the tropics through research aimed at increasing the eco-efficiency of agriculture. Research data produced by CIAT and its Partners is distributed freely whenever possible. Kindly note that these datasets require proper citation and citation information is included with the metadata for each dataset.

Archaeology Data Service

ADS

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The ADS is an accredited digital repository for heritage data that supports research, learning and teaching with freely available, high quality and dependable digital resources by preserving and disseminating digital data in the long term. The ADS also promotes good practice in the use of digital data, provides technical advice to the heritage community, and supports the deployment of digital technologies.

World Register of Marine Species

WoRMS

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The World Register of Marine Species (WoRMS) integrates approximately 100 marine datbases to provide an authoritative and comprehensive list of marine organisms. WoRMS has an editorial system where taxonomic groups are managed by experts responsible for the quality of the information. WorMS register of marine species emerged from the European Register of Marine Species (ERMS) and the Flanders Marine Institute (VLIZ). WoRMS is a contribution to Lifewatch, Catalogue of Life, Encyclopedia of Life, Global Biodiversity Information Facility and the Census of Marine Life.

MycoBank

Fungal databases, nomenclature and species banks

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MycoBank is an on-line database aimed as a service to the mycological and scientific society by documenting mycological nomenclatural novelties (new names and combinations) and associated data, for example descriptions and illustrations. The nomenclatural novelties will each be allocated a unique MycoBank number that can be cited in the publication where the nomenclatural novelty is introduced. These numbers will also be used by the nomenclatural database Index Fungorum, with which MycoBank is associated.

SABIO-RK

System for the Analysis of Biochemical Pathways - Reaction Kinetics

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The SABIO-RK is a web-based application based on the SABIO relational database that contains information about biochemical reactions, their kinetic equations with their parameters, and the experimental conditions under which these parameters were measured. It aims to support modellers in the setting-up of models of biochemical networks, but it is also useful for experimentalists or researchers with interest in biochemical reactions and their kinetics. All the data are manually curated and annotated by biological experts, supported by automated consistency checks.

CLARINO Bergen Center repository

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CLARINO Bergen Center repository is the repository of CLARINO, the Norwegian infrastructure project . Its goal is to implement the Norwegian part of CLARIN. The ultimate aim is to make existing and future language resources easily accessible for researchers and to bring eScience to humanities disciplines. The repository includes INESS the Norwegian Infrastructure for the Exploration of Syntax and Semantics. This infrastructure provides access to treebanks, which are databases of syntactically and semantically annotated sentences.

Data INRAE

INRAE data repository

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INRAE is the world’s first organisation specialized on agricultural, food and environmental sciences. Data INRAE is offered by INRAE as part of its mission to open the results of its research. Data INRAE will share research data in relation with food, nutrition, agriculture and environment. It includes experimental, simulation and observation data, omic data, survey and text data. Only data produced by or in collaboration with INRAE will be hosted in the repository, but anyone can access the metadata and the open data.

Open Science Framework

OSF

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The Open Science Framework (OSF) is part network of research materials, part version control system, and part collaboration software. The purpose of the software is to support the scientist's workflow and help increase the alignment between scientific values and scientific practices. Document and archive studies. Move the organization and management of study materials from the desktop into the cloud. Labs can organize, share, and archive study materials among team members. Web-based project management reduces the likelihood of losing study materials due to computer malfunction, changing personnel, or just forgetting where you put the damn thing. Share and find materials. With a click, make study materials public so that other researchers can find, use and cite them. Find materials by other researchers to avoid reinventing something that already exists. Detail individual contribution. Assign citable, contributor credit to any research material - tools, analysis scripts, methods, measures, data. Increase transparency. Make as much of the scientific workflow public as desired - as it is developed or after publication of reports. Find public projects here. Registration. Registering materials can certify what was done in advance of data analysis, or confirm the exact state of the project at important points of the lifecycle such as manuscript submission or at the onset of data collection. Discover public registrations here. Manage scientific workflow. A structured, flexible system can provide efficiency gain to workflow and clarity to project objectives, as pictured.

virus mentha

the interactome browser

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virus mentha archives evidence about viral interactions collected from different sources and presents these data in a complete and comprehensive way. Its data comes from manually curated protein-protein interaction databases that have adhered to the IMEx consortium. virus mentha is a resource that offers a series of tools to analyse selected proteins in the context of a network of interactions. Protein interaction databases archive protein-protein interaction (PPI) information from published articles. However, no database alone has sufficient literature coverage to offer a complete resource to investigate "the interactome". virus mentha's approach generates every week a consistent interactome (graph). Most importantly, the procedure assigns to each interaction a reliability score that takes into account all the supporting evidence. virus mentha offers direct access to viral families such as: Orthomyxoviridae, Orthoretrovirinae and Herpesviridae plus, it offers the unique possibility of searching by host organism. The website and the graphical application are designed to make the data stored in virus mentha accessible and analysable to all users.virus mentha superseeds VirusMINT. The Source databases are: MINT, DIP, IntAct, MatrixDB, BioGRID.

ScholarSphere

PennState ScholarSphere

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ScholarSphere is an institutional repository managed by Penn State University Libraries. Anyone with a Penn State Access ID can deposit materials relating to the University’s teaching, learning, and research mission to ScholarSphere. All types of scholarly materials, including publications, instructional materials, creative works, and research data are accepted. ScholarSphere supports Penn State’s commitment to open access and open science. Researchers at Penn State can use ScholarSphere to satisfy open access and data availability requirements from funding agencies and publishers.

LiVES Collection of Osteological Anthropometry Digest

LiVES COstA Digest

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The collection contains stature-related and other anthropometric data of 7686 skeletal individuals (including aggregated information for several individuals) from the prehistory of Southwest Asia and Europe. While the focus period of our collection is the Holocene ca. 10 000 to 1000 BC, the data collection also includes older specimens of anatomically modern humans (dating as early as 110 k BP in the case of Qafzeh). The upper date range in some cases extends to around 100 AD, although the great majority of datasets date no later than 600 BC. Correctness and completeness were pursued for all information relevant to stature, i.e. basic information such as sex (after Sjøvold 1988) and age (after Szilvássy 1988) as well as the long bone measurements, whereas other measurements were merely inherited from the two integrated older data bases and not explicitly checked. All measurements conform to the definitions given by Martin 1928. To grasp common publication practice in the literature, not only left and right body side, but also mean values from both sides as well as measurements with unknown siding have their own separate fields for the stature-related long bone measurements.