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Found 419 result(s)
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Rodare is the institutional research data repository at HZDR (Helmholtz-Zentrum Dresden-Rossendorf). Rodare allows HZDR researchers to upload their research software and data and enrich those with metadata to make them findable, accessible, interoperable and retrievable (FAIR). By publishing all associated research software and data via Rodare research reproducibility can be improved. Uploads receive a Digital Object Identfier (DOI) and can be harvested via a OAI-PMH interface.
TERN provides open data, research and management tools, data infrastructure and site-based research equipment. The open access ecosystem data is provided by TERN Data Discovery Portal , see https://www.re3data.org/repository/r3d100012013
Launched in 2000, WormBase is an international consortium of biologists and computer scientists dedicated to providing the research community with accurate, current, accessible information concerning the genetics, genomics and biology of C. elegans and some related nematodes. In addition to their curation work, all sites have ongoing programs in bioinformatics research to develop the next generations of WormBase structure, content and accessibility
The Saccharomyces Genome Database (SGD) provides comprehensive integrated biological information for the budding yeast Saccharomyces cerevisiae along with search and analysis tools to explore these data, enabling the discovery of functional relationships between sequence and gene products in fungi and higher organisms.
The Rat Genome Database is a collaborative effort between leading research institutions involved in rat genetic and genomic research. Its goal, as stated in RFA: HL-99-013 is the establishment of a Rat Genome Database, to collect, consolidate, and integrate data generated from ongoing rat genetic and genomic research efforts and make these data widely available to the scientific community. A secondary, but critical goal is to provide curation of mapped positions for quantitative trait loci, known mutations and other phenotypic data.
The IERS provides data on Earth orientation, on the International Celestial Reference System/Frame, on the International Terrestrial Reference System/Frame, and on geophysical fluids. It maintains also Conventions containing models, constants and standards.
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mdw Repository provides researchers with a robust infrastructure for research data management and ensures accessibility of research data during and after completion of research projects, thus, providing a quality boost to contemporary and future research.
The EUR Data Repository [EDR] is the institutional data repository from the Erasmus University Rotterdam. The EUR Data Repository is an online platform where you showcase your research and make it findable, citable, and reusable for others.
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aviDa is the RDC for audio-visual data of empirical qualitative social research at the Department of General Sociology at the Technische Universität Berlin, developed in cooperation between the Technische Universität Berlin and the University of Bayreuth. aviDa aims at opening and sharing videographic research data since 2018.
MIDRC aims to develop a high-quality repository for medical images related to COVID-19 and associated clinical data, and develop and foster medical image-based artificial intelligence (AI) for use in the detection, diagnosis, prognosis, and monitoring of COVID-19.
ShareGeo Open was a repository of geospatial data, previously hosted by EDINA. ShareGeo Open has been discontinued, so its datasets have been migrated to this Edinburgh DataShare Collection, for preservation, in accordance with the agreement signed by all ShareGeo depositors.
DEIMS-SDR (Dynamic Ecological Information Management System - Site and dataset registry) is an information management system that allows you to discover long-term ecosystem research sites around the globe, along with the data gathered at those sites and the people and networks associated with them. DEIMS-SDR describes a wide range of sites, providing a wealth of information, including each site’s location, ecosystems, facilities, parameters measured and research themes. It is also possible to access a growing number of datasets and data products associated with the sites. All sites and dataset records can be referenced using unique identifiers that are generated by DEIMS-SDR. It is possible to search for sites via keyword, predefined filters or a map search. By including accurate, up to date information in DEIMS, site managers benefit from greater visibility for their LTER site, LTSER platform and datasets, which can help attract funding to support site investments. The aim of DEIMS-SDR is to be the globally most comprehensive catalogue of environmental research and monitoring facilities, featuring foremost but not exclusively information about all LTER sites on the globe and providing that information to science, politics and the public in general.
The Protein Data Bank (PDB) archive is the single worldwide repository of information about the 3D structures of large biological molecules, including proteins and nucleic acids. These are the molecules of life that are found in all organisms including bacteria, yeast, plants, flies, other animals, and humans. Understanding the shape of a molecule helps to understand how it works. This knowledge can be used to help deduce a structure's role in human health and disease, and in drug development. The structures in the archive range from tiny proteins and bits of DNA to complex molecular machines like the ribosome.
The mission of the GDC is to curate and provide access to oceanographic data, especially from Scripps expeditions, making them accessible for scientific and educational use worldwide. Originally launched by Bill Menard, the GDC has been in operation for more than 40 years. While many historic physical artifacts are carefully preserved, the current emphasis is on digital archiving, in coordination with other national and international programs.
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<<<!!!<<< 2017-06-02: We recently suffered a server failure and are working to bring the full ORegAnno website back online. In the meantime, you may download the complete database here: http://www.oreganno.org/dump/ ; Data are also available through UCSC Genome Browser (e.g., hg38 -> Regulation -> ORegAnno) https://genome.ucsc.edu/cgi-bin/hgTrackUi?hgsid=686342163_2it3aVMQVoXWn0wuCjkNOVX39wxy&c=chr1&g=oreganno >>>!!!>>> The Open REGulatory ANNOtation database (ORegAnno) is an open database for the curation of known regulatory elements from scientific literature. Annotation is collected from users worldwide for various biological assays and is automatically cross-referenced against PubMED, Entrez Gene, EnsEMBL, dbSNP, the eVOC: Cell type ontology, and the Taxonomy database, where appropriate, with information regarding the original experimentation performed (evidence). ORegAnno further provides an open validation process for all regulatory annotation in the public domain. Assigned validators receive notification of new records in the database and are able to cross-reference the citation to ensure record integrity. Validators have the ability to modify any record (deprecating the old record and creating a new one) if an error is found. Further, any contributor to the database can comment on any annotation by marking errors, or adding special reports into function as they see fit. These features of ORegAnno ensure that the collection is of the highest quality and uniquely provides a dynamic view of our changing understanding of gene regulation in the various genomes.
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The Slovenian Social Science Data Archives (Slovenski Arhiv Družboslovnih podatkov - ADP) were established in 1997 as an organizational unit within the Institute of Social Sciences at the Faculty of Social Sciences, University of Ljubljana. Its tasks are to acquire significant data sources within a wide range of social science disciplines of interest to Slovenian social scientists, review and prepare them for digital preservation, and to disseminate them for further scientific, educational and other purposes.
LAUDATIO has developed an open access research data repository for historical corpora. For the access and (re-)use of historical corpora, the LAUDATIO repository uses a flexible and appropriate documentation schema with a subset of TEI customized by TEI ODD. The extensive metadata schema contains information about the preparation and checking methods applied to the data, tools, formats and annotation guidelines used in the project, as well as bibliographic metadata, and information on the research context (e.g. the research project). To provide complex and comprehensive search in the annotation data, the search and visualization tool ANNIS is integrated in the LAUDATIO-Repository.
The UK Polar Data Centre (UK PDC) is the focal point for Arctic and Antarctic environmental data management in the UK. Part of the Natural Environmental Research Council’s (NERC) network of environmental data centres and based at the British Antarctic Survey, it coordinates the management of polar data from UK-funded research and supports researchers in complying with national and international data legislation and policy.
IEEE DataPort™ is a universally accessible online data repository created, owned, and supported by IEEE, the world’s largest technical professional organization. It enables all researchers and data owners to upload their dataset without cost. IEEE DataPort makes data available in three ways: standard datasets, open access datasets, and data competition datasets. By default, all "standard" datasets that are uploaded are accessible to paid IEEE DataPort subscribers. Data owners have an option to pay a fee to make their dataset “open access”, so it is available to all IEEE DataPort users (no subscription required). The third option is to host a "data competition" and make a dataset accessible for free for a specific duration with instructions for the data competition and how to participate. IEEE DataPort provides workflows for uploading data, searching, and accessing data, and initiating or participating in data competitions. All datasets are stored on Amazon AWS S3, and each dataset uploaded by an individual can be up to 2TB in size. Institutional subscriptions are available to the platform to make it easy for all members of a given institution to utilize the platform and upload datasets.
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Borealis, the Canadian Dataverse Repository, is a bilingual, multidisciplinary, secure, Canadian research data repository, supported by academic libraries and research institutions across Canada. Borealis supports open discovery, management, sharing, and preservation of Canadian research data. Borealis is available to researchers who are affiliated with a participating Canadian university or research organization and their collaborators. Borealis is a shared service provided in partnership with Canadian regional academic library consortia, institutions, research organizations, and the Digital Research Alliance of Canada, with technical infrastructure hosted by Scholars Portal and the University of Toronto Libraries.
The German Text Archive (Deutsches Textarchiv, DTA) presents online a selection of key German-language works in various disciplines from the 17th to 19th centuries. The electronic full-texts are indexed linguistically and the search facilities tolerate a range of spelling variants. The DTA presents German-language printed works from around 1650 to 1900 as full text and as digital facsimile. The selection of texts was made on the basis of lexicographical criteria and includes scientific or scholarly texts, texts from everyday life, and literary works. The digitalisation was made from the first edition of each work. Using the digital images of these editions, the text was first typed up manually twice (‘double keying’). To represent the structure of the text, the electronic full-text was encoded in conformity with the XML standard TEI P5. The next stages complete the linguistic analysis, i.e. the text is tokenised, lemmatised, and the parts of speech are annotated. The DTA thus presents a linguistically analysed, historical full-text corpus, available for a range of questions in corpus linguistics. Thanks to the interdisciplinary nature of the DTA Corpus, it also offers valuable source-texts for neighbouring disciplines in the humanities, and for scientists, legal scholars and economists.
The SURF Data Repository is a user-friendly web-based data publication platform that allows researchers to store, annotate and publish research datasets of any size to ensure long-term preservation and availability of their data. The service allows any dataset to be stored, independent of volume, number of files and structure. A published dataset is enriched with complex metadata, unique identifiers are added and the data is preserved for an agreed-upon period of time. The service is domain-agnostic and supports multiple communities with different policy and metadata requirements.