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Found 348 result(s)

NCBI dbMHC

Major histocompatibility Complex database

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<<<!!!<<< The repository is no longer available - Data previously on the site are now available at ftp://ftp.ncbi.nlm.nih.gov/pub/mhc/mhc/Final Archive. >>>!!!>>> The dbMHC database provides an open, publicly accessible platform for DNA and clinical data related to the human Major Histocompatibility Complex (MHC). The dbMHC provides access to human leukocyte antigen (HLA) sequences, HLA allele and haplotype frequencies, and clinical datasets.

VertNet

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VertNet is a NSF-funded collaborative project that makes biodiversity data free and available on the web. VertNet is a tool designed to help people discover, capture, and publish biodiversity data. It is also the core of a collaboration between hundreds of biocollections that contribute biodiversity data and work together to improve it. VertNet is an engine for training current and future professionals to use and build upon best practices in data quality, curation, research, and data publishing. Yet, VertNet is still the aggregate of all of the information that it mobilizes. To us, VertNet is all of these things and more.

RCSB Protein Data Bank

RCSB PDB

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The Protein Data Bank (PDB) archive is the single worldwide repository of information about the 3D structures of large biological molecules, including proteins and nucleic acids. These are the molecules of life that are found in all organisms including bacteria, yeast, plants, flies, other animals, and humans. Understanding the shape of a molecule helps to understand how it works. This knowledge can be used to help deduce a structure's role in human health and disease, and in drug development. The structures in the archive range from tiny proteins and bits of DNA to complex molecular machines like the ribosome.

Unidata's RAMADDA

Unidata's Motherlode Repository

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Our mission is to provide the data services, tools, and cyberinfrastructure leadership that advance earth-system science, enhance educational opportunities, and broaden participation. Unidata's main RAMADDA server contains access to a variety of datasets including the full IDD feed, Case Studies and other project data. RAMADDA is a content management system for Earth Science data. More information is available here: https://ramadda.org/?

U.S. Department of Labor, Bureau of Labor Statistics

United States Department of Labor, Bureau of Labor Statistics

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The U.S. Bureau of Labor Statistics collects, analyzes, and publishes reliable information on many aspects of the United States economy and society. They measure employment, compensation, worker safety, productivity, and price movements. This information is used by jobseekers, workers, business leaders, and others to assist them in making sound decisions at work and at home. Statistical data covers a wide range of topics about the labor market, economy and society in the U.S.; subject areas include: Inflation & Prices, Employment, Unemployment, Pay & Benefits, Spending & Time Use, Productivity, Workplace Injuries, International, and Regional Resources. Data is available in multiple formats including charts and tables as well as Bureau of Labor Statistics publications.

eBird

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eBird is among the world’s largest biodiversity-related science projects, with more than 1 billion records, more than 100 million bird sightings contributed annually by eBirders around the world, and an average participation growth rate of approximately 20% year over year. A collaborative enterprise with hundreds of partner organizations, thousands of regional experts, and hundreds of thousands of users, eBird is managed by the Cornell Lab of Ornithology. eBird data document bird distribution, abundance, habitat use, and trends through checklist data collected within a simple, scientific framework. Birders enter when, where, and how they went birding, and then fill out a checklist of all the birds seen and heard during the outing. Data can be accessed from the Science tab on the website.

FactGrid

a database for historians

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FactGrid is a Wikibase instance designed to be used by historians with a focus on international projects. The database is hosted by the University of Erfurt and coordinated at the Gotha Research Centre. Partners in joint ventures are Wikimedia Germany as the software provider and the German National Library in a project to open the GND to international research.

NIST Standard Reference Data

SRD

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NIST Data Gateway - provides easy access to many of the NIST scientific and technical databases. These databases cover a broad range of substances and properties from many different scientific disciplines. The Gateway includes links to free online NIST data systems as well as to information on NIST PC databases available for purchase.

MaizeGDB

Maize Genetics and Genomics Database

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The Maize Genetics and Genomics Database focuses on collecting data related to the crop plant and model organism Zea mays. The project's goals are to synthesize, display, and provide access to maize genomics and genetics data, prioritizing mutant and phenotype data and tools, structural and genetic map sets, and gene models. MaizeGDB also aims to make the Maize Newsletter available, and provide support services to the community of maize researchers. MaizeGDB is working with the Schnable lab, the Panzea project, The Genome Reference Consortium, and iPlant Collaborative to create a plan for archiving, dessiminating, visualizing, and analyzing diversity data. MMaizeGDB is short for Maize Genetics/Genomics Database. It is a USDA/ARS funded project to integrate the data found in MaizeDB and ZmDB into a single schema, develop an effective interface to access this data, and develop additional tools to make data analysis easier. Our goal in the long term is a true next-generation online maize database.aize genetics and genomics database.

World Data Centre for Precipitation Chemistry

WDCPC

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This centre receives and archives precipitation chemistry data and complementary information from stations around the world. Data archived by this centre are accessible via connections with the WDCPC database. Freely available data from regional and national programmes with their own Web sites are accessible via links to these sites. The WDCPC is one of six World Data Centres in the World Meteorological Organization Global Atmosphere Watch (GAW). The focus on precipitation chemistry is described in the GAW Precipitation Chemistry Programme. Guidance on all aspects of collecting precipitation for chemical analysis is provided in the Manual for the GAW Precipitation Chemistry Programme (WMO-GAW Report No. 160).

Physical Oceanography Distributed Active Archive Center

PO.DAAC

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The Physical Oceanography Distributed Active Archive Center (PO.DAAC) is an element of the Earth Observing System Data and Information System (EOSDIS). The EOSDIS provides science data to a wide community of users for NASA's Science Mission Directorate. Since the launch of NASA's first ocean-observing satellite, Seasat, in 1978, PO.DAAC has become the premier data center for measurements focused on ocean surface topography (OST), sea surface temperature (SST), ocean winds, sea surface salinity (SSS), gravity, ocean circulation and sea ice.In addition to providing access to its data holdings, PO.DAAC acts as a gateway to data stored at other ocean and climate archives. This and other tools and services enable PO.DAAC to support a wide user community working in areas such as ocean and climate research, applied science and industry, natural resource management, policy making, and general public consumption.

LAADS DAAC

LAADS web

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LAADS DAAC is the web interface to the Level 1 and Atmosphere Archive and Distribution System (LAADS). The mission of LAADS is to provide quick and easy access to MODIS Level 1, Atmosphere and Land data products, VIIRS Level 1 and Land data products MAS and MERIS data products. MODIS (or Moderate Resolution Imaging Spectroradiometer) is a key instrument aboard the Terra (EOS AM) and Aqua (EOS PM) satellites.

Xenbase

Xenopus Genomics Database

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Xenbase's mission is to provide the international research community with a comprehensive, integrated and easy to use web based resource that gives access the diverse and rich genomic, expression and functional data available from Xenopus research. Xenbase also provides a critical data sharing infrastructure for many other NIH-funded projects, and is a focal point for the Xenopus community. In addition to our primary goal of supporting Xenopus researchers, Xenbase enhances the availability and visibility of Xenopus data to the broader biomedical research community.

SuperDARN

Super Dual Auroral Radar Network

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SuperDARN is an international HF radar network designed to measure global-scale magnetospheric convection by observing plasma motion in the Earth’s upper atmosphere. This network consists of more than 20 radars operating on frequencies between 8 and 20 MHz that look into the polar regions of Earth. These radars can measure the position and velocity of charged particles in our ionosphere, the highest layer of the Earth's atmosphere, and provide scientists with information regarding Earth's interaction with the space environment.

studyforrest

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This project is an open invitation to anyone and everyone to participate in a decentralized effort to explore the opportunities of open science in neuroimaging. We aim to document how much (scientific) value can be generated from a data release — from the publication of scientific findings derived from this dataset, algorithms and methods evaluated on this dataset, and/or extensions of this dataset by acquisition and incorporation of new data. The project involves the processing of acoustic stimuli. In this study, the scientists have demonstrated an audiodescription of classic "Forrest Gump" to subjects, while researchers using functional magnetic resonance imaging (fMRI) have captured the brain activity of test candidates in the processing of language, music, emotions, memories and pictorial representations.In collaboration with various labs in Magdeburg we acquired and published what is probably the most comprehensive sample of brain activation patterns of natural language processing. Volunteers listened to a two-hour audio movie version of the Hollywood feature film "Forrest Gump" in a 7T MRI scanner. High-resolution brain activation patterns and physiological measurements were recorded continuously. These data have been placed into the public domain, and are freely available to the scientific community and the general public.

Radiation Belt Storm Probes Ion Composition Experiment

RBSPICE

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Originally named the Radiation Belt Storm Probes (RBSP), the mission was re-named the Van Allen Probes, following successful launch and commissioning. For simplicity and continuity, the RBSP short-form has been retained for existing documentation, file naming, and data product identification purposes. The RBSPICE investigation including the RBSPICE Instrument SOC maintains compliance with requirements levied in all applicable mission control documents.

NASA Socioeconomic Data and Applications Center

SEDAC

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SEDAC, the Socioeconomic Data and Applications Center, is one of the Distributed Active Archive Centers (DAACs) in the Earth Observing System Data and Information System (EOSDIS) of the U.S. National Aeronautics and Space Administration. SEDAC is a regular member of the World Data System and focuses on human interactions in the environment. Its mission is to develop and operate applications that support the integration of socioeconomic and Earth science data and to serve as an "Information Gateway" between the Earth and social sciences.

Space Physics Data Facility

NASA's Space Physics Data Facility

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The Space Physics Data Facility (SPDF) leads in the design and implementation of unique multi-mission and multi-disciplinary data services and software to strategically advance NASA's solar-terrestrial program, to extend our science understanding of the structure, physics and dynamics of the Heliosphere of our Sun and to support the science missions of NASA's Heliophysics Great Observatory. Major SPDF efforts include multi-mission data services such as Heliophysics Data Portal (formerly VSPO), CDAWeb and CDAWeb Inside IDL,and OMNIWeb Plus (including COHOWeb, ATMOWeb, HelioWeb and CGM) , science planning and orbit services such as SSCWeb, data tools such as the CDF software and tools, and a range of other science and technology research efforts. The staff supporting SPDF includes scientists and information technology experts.

brainlife

brainlife.io

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Brainlife promotes engagement and education in reproducible neuroscience. We do this by providing an online platform where users can publish code (Apps), Data, and make it "alive" by integragrate various HPC and cloud computing resources to run those Apps. Brainlife also provide mechanisms to publish all research assets associated with a scientific project (data and analyses) embedded in a cloud computing environment and referenced by a single digital-object-identifier (DOI). The platform is unique because of its focus on supporting scientific reproducibility beyond open code and open data, by providing fundamental smart mechanisms for what we refer to as “Open Services.”

AmeriFlux

Measuring carbon, water and energy flux across the Americas

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AmeriFlux is a network of PI-managed sites measuring ecosystem CO2, water, and energy fluxes in North, Central and South America. It was established to connect research on field sites representing major climate and ecological biomes, including tundra, grasslands, savanna, crops, and conifer, deciduous, and tropical forests. As a grassroots, investigator-driven network, the AmeriFlux community has tailored instrumentation to suit each unique ecosystem. This “coalition of the willing” is diverse in its interests, use of technologies and collaborative approaches. As a result, the AmeriFlux Network continually pioneers new ground.

VIPERdb

Virus Particle Explorer database

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VIPERdb is a database for icosahedral virus capsid structures . The emphasis of the resource is on providing data from structural and computational analyses on these systems, as well as high quality renderings for visual exploration. In addition, all virus capsids are placed in a single icosahedral orientation convention, facilitating comparison between different structures. The web site includes powerful search utilities , links to other relevant databases, background information on virus capsid structure, and useful database interface tools.

Academic Torrents

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Academic Torrents is a distributed data repository. The academic torrents network is built for researchers, by researchers. Its distributed peer-to-peer library system automatically replicates your datasets on many servers, so you don't have to worry about managing your own servers or file availability. Everyone who has data becomes a mirror for those data so the system is fault-tolerant.

Argovis

A Web Application for Fast Delivery, Visualization, and Analysis of Argo Data

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Earth science data visualization and data delivery application.

OrtholugeDB

The Ortholog Database

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OrtholugeDB contains Ortholuge-based orthology predictions for completely sequenced bacterial and archaeal genomes. It is also a resource for reciprocal best BLAST-based ortholog predictions, in-paralog predictions (recently duplicated genes) and ortholog groups in Bacteria and Archaea. The Ortholuge method improves the specificity of high-throughput orthology prediction.

Universal PBM Resource for Oligonucleotide Binding Evaluation

UniPROBE

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The UniPROBE (Universal PBM Resource for Oligonucleotide Binding Evaluation) database hosts data generated by universal protein binding microarray (PBM) technology on the in vitro DNA binding specificities of proteins. This initial release of the UniPROBE database provides a centralized resource for accessing comprehensive data on the preferences of proteins for all possible sequence variants ('words') of length k ('k-mers'), as well as position weight matrix (PWM) and graphical sequence logo representations of the k-mer data. In total, the database currently hosts DNA binding data for 406 nonredundant proteins from a diverse collection of organisms, including the prokaryote Vibrio harveyi, the eukaryotic malarial parasite Plasmodium falciparum, the parasitic Apicomplexan Cryptosporidium parvum, the yeast Saccharomyces cerevisiae, the worm Caenorhabditis elegans, mouse, and human. The database's web tools (on the right) include a text-based search, a function for assessing motif similarity between user-entered data and database PWMs, and a function for locating putative binding sites along user-entered nucleotide sequences