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Found 23 result(s)

HUGO Gene Nomenclature Committee

HGNC

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The HUGO Gene Nomenclature Committee (HGNC) assigned unique gene symbols and names to over 35,000 human loci, of which around 19,000 are protein coding. This curated online repository of HGNC-approved gene nomenclature and associated resources includes links to genomic, proteomic and phenotypic information, as well as dedicated gene family pages.

Prompt Assessment of Global Earthquakes for Response

PAGER

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PAGER (Prompt Assessment of Global Earthquakes for Response) is an automated system that produces content concerning the impact of significant earthquakes around the world, informing emergency responders, government and aid agencies, and the media of the scope of the potential disaster. PAGER rapidly assesses earthquake impacts by comparing the population exposed to each level of shaking intensity with models of economic and fatality losses based on past earthquakes in each country or region of the world. Earthquake alerts – which were formerly sent based only on event magnitude and location, or population exposure to shaking – now will also be generated based on the estimated range of fatalities and economic losses. PAGER uses these earthquake parameters to calculate estimates of ground shaking by using the methodology and software developed for ShakeMaps. ShakeMap sites provide near-real-time maps of ground motion and shaking intensity following significant earthquakes. These maps are used by federal, state, and local organizations, both public and private, for post-earthquake response and recovery, public and scientific information, as well as for preparedness exercises and disaster planning.

Open Data by Socrata

Socrata

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>>>!!!<<< This site is going away on April 1, 2021. General access to the site has been disabled and community users will see an error upon login. >>>!!!<<< Socrata’s cloud-based solution allows government organizations to put their data online, make data-driven decisions, operate more efficiently, and share insights with citizens.

data.world

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A data repository and social network so that researchers can interact and collaborate, also offers tutorials and datasets for data science learning. "data.world is designed for data and the people who work with data. From professional projects to open data, data.world helps you host and share your data, collaborate with your team, and capture context and conclusions as you work."

U.S. Energy Information Administration

EIA

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The U.S. Energy Information Administration (EIA) collects, analyzes, and disseminates independent and impartial energy information to promote sound policymaking, efficient markets, and public understanding of energy and its interaction with the economy and the environment.

TriTrypDB

kinetoplastid genomics resource

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TriTrypDB is an integrated genomic and functional genomic database for pathogens of the family Trypanosomatidae, including organisms in both Leishmania and Trypanosoma genera. TriTrypDB and its continued development are possible through the collaborative efforts between EuPathDB, GeneDB and colleagues at the Seattle Biomedical Research Institute (SBRI).

Phytozome

The JGI Comparative Plant Genomics Portal

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Phytozome is the Plant Comparative Genomics portal of the Department of Energy's Joint Genome Institute. Families of related genes representing the modern descendants of ancestral genes are constructed at key phylogenetic nodes. These families allow easy access to clade-specific orthology/paralogy relationships as well as insights into clade-specific novelties and expansions.

mentha

the interactome browser

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mentha archives evidence collected from different sources and presents these data in a complete and comprehensive way. Its data comes from manually curated protein-protein interaction databases that have adhered to the IMEx consortium. The aggregated data forms an interactome which includes many organisms. mentha is a resource that offers a series of tools to analyse selected proteins in the context of a network of interactions. Protein interaction databases archive protein-protein interaction (PPI) information from published articles. However, no database alone has sufficient literature coverage to offer a complete resource to investigate "the interactome". mentha's approach generates every week a consistent interactome (graph). Most importantly, the procedure assigns to each interaction a reliability score that takes into account all the supporting evidence. mentha offers eight interactomes (Homo sapiens, Arabidopsis thaliana, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli K12, Mus musculus, Rattus norvegicus, Saccharomyces cerevisiae) plus a global network that comprises every organism, including those not mentioned. The website and the graphical application are designed to make the data stored in mentha accessible and analysable to all users. Source databases are: MINT, IntAct, DIP, MatrixDB and BioGRID.

U.S. Department of Labor, Bureau of Labor Statistics

United States Department of Labor, Bureau of Labor Statistics

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The U.S. Bureau of Labor Statistics collects, analyzes, and publishes reliable information on many aspects of the United States economy and society. They measure employment, compensation, worker safety, productivity, and price movements. This information is used by jobseekers, workers, business leaders, and others to assist them in making sound decisions at work and at home. Statistical data covers a wide range of topics about the labor market, economy and society in the U.S.; subject areas include: Inflation & Prices, Employment, Unemployment, Pay & Benefits, Spending & Time Use, Productivity, Workplace Injuries, International, and Regional Resources. Data is available in multiple formats including charts and tables as well as Bureau of Labor Statistics publications.

Tropicos®

w³Tropicos

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Tropicos® was originally created for internal research but has since been made available to the world’s scientific community. All of the nomenclatural, bibliographic, and specimen data accumulated in MBG’s electronic databases during the past 30 years are publicly available here.

Surveillance Epidemiology and End Results

SEER

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A premier source for United States cancer statistics, SEER gathers information related to incidence, prevalence, and survival from specific geographic areas that represent 28 percent of the population, as well as compiles related reports and reports on the national cancer mortality rates. Their aim is to provide information related to cancer statistics and decrease the burden of cancer in the national population. SEER has been collecting data from cancer cases since 1973.

USGS National Water Information System

NWIS

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Central data management of the USGS for water data that provides access to water-resources data collected at approximately 1.5 million sites in all 50 States, the District of Columbia, Puerto Rico, the Virgin Islands, Guam, American Samoa and the Commonwealth of the Northern Mariana Islands. Includes data on water use and quality, groundwater, and surface water.

CryptoDB

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CryptoDB is an integrated genomic and functional genomic database for the parasite Cryptosporidium and other related genera. CryptoDB integrates whole genome sequence and annotation along with experimental data and environmental isolate sequences provided by community researchers. The database includes supplemental bioinformatics analyses and a web interface for data-mining.

Electron Microscopy Data Bank

EMDB

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The Electron Microscopy Data Bank (EMDB) is a public repository for electron microscopy density maps of macromolecular complexes and subcellular structures. It covers a variety of techniques, including single-particle analysis, electron tomography, and electron (2D) crystallography.

Taiwan Biodiversity Information Facility

TaiBIF

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"TaiBIF" stands for Taiwan Biodiversity Information Facility. It is the Taiwan portal of GBIF, and is in charge of integrating Taiwan's biodiversity information, including lists of species and local experts, illustrations of species, introduction of endemic species and invasive species, Taiwan's terrestrial and marine organisms, biodiversity literature, geographical and environmental information, information about relevant institutions, organizations, projects, and observation spots, the Catalog of Life (a list of Taiwanese endemic species), and publications.

Agency for Healthcare Research and Quality, Data & Surveys

AHRQ data & surveys

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A collection of data at Agency for Healthcare Research and Quality (AHRQ) supporting research that helps people make more informed decisions and improves the quality of health care services. The portal contains U.S.Health Information Knowledgebase (USHIK) and Systematic Review Data Repository (SRDR) and other sources concerning cost, quality, accesibility and evaluation of healthcare and medical insurance.

GeoPlatform

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The GeoPlatform provides shared and trusted geospatial data, services, and applications for use by the public and by government agencies and partners to meet their mission needs.

ClinicalTrials.gov

A service of the U.S. National Institutes of Health

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ClinicalTrials.gov is a website and online database of clinical research studies and information about their results. The purpose of ClinicalTrials.gov is to provide information about clinical research studies to the public, researchers, and health care professionals. The U.S. government does not review or approve the safety and science of all studies listed on this website.

Kenya Open Data

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Kenya Open Data offers visualizations tools, data downloads, and easy access for software developers. Kenya Open Data provides core government development, demographic, statistical and expenditure data available for researchers, policymakers, developers and the general public. Kenya is the first developing country to have an open government data portal, the first in sub-Saharan Africa and second on the continent after Morocco. The initiative has been widely acclaimed globally as one of the most significant steps Kenya has made to improve governance and implement the new Constitution’s provisions on access to information.

NOAA National Centers for Environmental Information - formerly: National Coastal Data Development Center

NCDDC

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<<<!!!<<< The demand for high-value environmental data and information has dramatically increased in recent years. To improve our ability to meet that demand, NOAA’s former three data centers—the National Climatic Data Center, the National Geophysical Data Center, and the National Oceanographic Data Center, which includes the National Coastal Data Development Center—have merged into the National Centers for Environmental Information (NCEI). >>>!!!>>> The National Coastal Data Development Center, a division of the National Oceanographic Data Center, is dedicated to building the long-term coastal data record to support environmental prediction, scientific analysis, and formulation of public policy.

United States Department of Agriculture, Economic Research Service, Data Products

USDA ERS Data Products

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The ERS mission is to inform and enhance public and private decision making on economic and policy issues related to agriculture, food, the environment, and rural development.

IRMA Portal

Integrated Resource Management Applications Portal

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IRMA (Integrated Resource Management Applications) provides natural and cultural resources data from the National Park Service. Most entries are in the form of peer-reviewed publications, but some are raw data sets based on in-park research projects.

FlowRepository

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FlowRepository is a web-based application accessible from a web browser that serves as an online database of flow cytometry experiments where users can query and download data collected and annotated according to the MIFlowCyt standard. It is primarily used as a data deposition place for experimental findings published in peer-reviewed journals in the flow cytometry field. FlowRepository is funded by the International Society for Advancement of Cytometry (ISAC) and powered by the Cytobank engine specifically extended for the purposes of this repository. FlowRepository has been developed by forking and extending Cytobank in 2011.