Repository details

STRING

Name of repository
STRING
Additional name(s)
  • Known and Predicted Protein-Protein Interactions
Repository URL
https://string-db.org/
Subject(s)
Description
STRING is a database of known and predicted protein interactions. The interactions include direct (physical) and indirect (functional) associations; they are derived from four sources: - Genomic Context - High-throughput Experiments - (Conserved) Coexpression - Previous Knowledge STRING quantitatively integrates interaction data from these sources for a large number of organisms, and transfers information between these organisms where applicable.
Contact
Content type(s)
Keyword(s)
Persistent identifier(s) of the repository
  • RRID:SCR_005223
  • RRID:nif-0000-03503
  • MIR:00000265
  • OMICS_29032
  • FAIRsharing_doi:10.25504/FAIRsharing.9b7wvk
Repository size
59.3 mio proteins; 12.535 organisms
Repository type(s)
  • disciplinary
Research data repository language(s)
  • English
Data and/or service provider
  • data provider
  • service provider
Institution name
EMBO
Additional name(s)
  • European Molecular Biology Organization
  • Gesellschaft zur Förderung der Lebenswissenschaften Heidelberg GmbH
Identifier(s)
  • ROR:04wfr2810
Contact(s)
Country
European Union
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution name
European Commission
Additional name(s)
  • EC
Country
European Union
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution name
European Molecular Biology Laboratory
Additional name(s)
  • EMBL
Identifier(s)
  • ROR:03mstc592
  • RRID:SCR_004473
Contact(s)
Country
European Union
Type(s) of responsibility
  • general
  • technical
Type of institution
non-profit
Institution name
Federal Ministry of Education and Research
Additional name(s)
  • Bundesministerium für Bildung und Forschung
Identifier(s)
  • ROR:04pz7b180
  • RRID:SCR_005066
Country
Germany
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution name
Technische Universität Dresden, Biotechnology Center
Additional name(s)
  • TUD, BIOTEC
Identifier(s)
  • RRID:SCR_005715
Country
Germany
Type(s) of responsibility
  • general
  • technical
Type of institution
non-profit
Institution name
University of Copenhagen, The Novo Nordisk Foundation, Center for Protein Research
Additional name(s)
  • NNF Center for Protein Research
Contact(s)
  • ku@ku.dk
Country
Denmark
Type(s) of responsibility
  • general
  • technical
Type of institution
non-profit
Institution name
University of Zurich
Additional name(s)
  • UZH
  • Universität Zürich
Identifier(s)
  • ROR:02crff812
  • RRID:SCR_000342
Contact(s)
Country
Switzerland
Type(s) of responsibility
  • general
  • technical
Type of institution
non-profit
Institution name
Universität Basel, The Center for Molecular Life Sciences, Swiss Institute of Bioinformatics
Additional name(s)
  • SIB
Identifier(s)
  • ROR:002n09z45
  • RRID:SCR_012816
Country
Switzerland
Type(s) of responsibility
  • general
  • technical
Type of institution
non-profit

Database access

Type of access to research data repository
open

Data access (1)

Type of access to data
open

Data licenses (1)

DataLicense
CC

Data upload (1)

Type of data upload
closed
Persistent identifier system(s)
  • other
Name of the repository software
  • other
Versioning
yes
Data citation guideline
https://string-db.org/cgi/about?footer_active_subpage=references
Enhanced Publication
unknown
Quality management
yes

Application programming interfaces (1)

API type
REST

Metadata standards (1)

Metadata standard name
Repository-Developed Metadata Schemas
Metadata standard scheme
DCC

Remarks

Entry date
2014-02-08
Last update
2023-11-08
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Cite this re3data.org record:

re3data.org: STRING; editing status 2023-11-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3VS40 last accessed: 2024-04-20